Bo3g184590 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g184590 T267295_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY

RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.815 0.723
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN

NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.815 0.723
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN

NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.753 0.638
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.701 0.617
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g184590.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF281 Homo sapiens ENSG00000162702 D 0.000
Zfp281 Mus musculus ENSMUSG00000041483 D 0.000
znf281a Tetraodon nigroviridis ENSTNIG00000016430 I 0.000
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I 0.000
ZNF281 Sus scrofa ENSSSCG00000010911 I 0.000
Zfp281 Rattus norvegicus ENSRNOG00000058643 I 0.000
ZNF281 Pan troglodytes ENSPTRG00000015318 I 0.000
ENSPFOG00000008024 Poecilia formosa ENSPFOG00000008024 I 0.000
ENSPFOG00000000851 Poecilia formosa ENSPFOG00000000851 I 0.000
ENSPANG00000017386 Papio anubis ENSPANG00000017386 I 0.000
znf148 Oryzias latipes ENSORLG00000015950 I 0.000
znf281b Oryzias latipes ENSORLG00000005292 I 0.000
znf281a Oryzias latipes ENSORLG00000002799 I 0.000
ENSONIG00000016453 Oreochromis niloticus ENSONIG00000016453 I 0.000
ENSONIG00000000839 Oreochromis niloticus ENSONIG00000000839 I 0.000
ZNF281 Otolemur garnettii ENSOGAG00000010366 I 0.000
znf281 Xenopus tropicalis XB-GENE-5933312 I 0.000
znf281b Tetraodon nigroviridis ENSTNIG00000018917 I 0.000
Tal_R010113 Tyto alba Tal_R010113 I 0.000
Pvit_14619 Pogona vitticeps Pvit_14619 I 0.000
Pvit_03082 Pogona vitticeps Pvit_03082 I 0.000
Ogr00130 Ophisaurus gracilis Ogr00130 I 0.000
Gfo_R006633 Geospiza fortis Gfo_R006633 I 0.000
ENSP00000356322 Macaca fascicularis ENSP00000356322 I 0.000
ENSP00000356322-D1 Bos grunniens ENSP00000356322-D1 I 0.000
Cmyd_10021057 Chelonia mydas Cmyd_10021057 I 0.000
Brh_R005182 Buceros rhinoceros Brh_R005182 I 0.000
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I 0.000
Afo_R004007 Aptenodytes forsteri Afo_R004007 I 0.000
Aan_R014758 Calypte anna Aan_R014758 I 0.000
ZNF281 Tursiops truncatus ENSTTRG00000004326 I 0.000
znf281a Takifugu rubripes ENSTRUG00000016619 I 0.000
znf281b Takifugu rubripes ENSTRUG00000008207 I 0.000
ZNF281 Oryctolagus cuniculus ENSOCUG00000010120 I 0.000
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I 0.000
ZNF281 Erinaceus europaeus ENSEEUG00000011443 I 0.000
ZNF281 Equus caballus ENSECAG00000024354 I 0.000
Zfp281 Dipodomys ordii ENSDORG00000002833 I 0.000
ZNF281 Dasypus novemcinctus ENSDNOG00000016981 I 0.000
znf148 Danio rerio ENSDARG00000055106 I 0.000
znf281b Danio rerio ENSDARG00000035910 I 0.000
znf281a Danio rerio ENSDARG00000000567 I 0.000
ENSCSAG00000000250 Chlorocebus sabaeus ENSCSAG00000000250 I 0.000
ZNF281 Callithrix jacchus ENSCJAG00000005104 I 0.000
ZNF281 Choloepus hoffmanni ENSCHOG00000004074 I 0.000
ENSAMXG00000015147 Astyanax mexicanus ENSAMXG00000015147 I 0.000
ENSAMXG00000006245 Astyanax mexicanus ENSAMXG00000006245 I 0.000
ENSAMXG00000006043 Astyanax mexicanus ENSAMXG00000006043 I 0.000
ZNF148 Anolis carolinensis ENSACAG00000010047 I 0.000
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I 0.000
ZNF281 Felis catus ENSFCAG00000028447 I 0.000
ENSNLEG00000018067 Nomascus leucogenys ENSNLEG00000018067 I 0.000
ENSMPUG00000019246 Mustela putorius furo ENSMPUG00000019246 I 0.000
ZNF281 Monodelphis domestica ENSMODG00000012840 I 0.000
ZNF281 Macaca mulatta ENSMMUG00000007334 I 0.000
ZNF281 Microcebus murinus ENSMICG00000001070 I 0.000
ENSMEUG00000011709 Macropus eugenii ENSMEUG00000011709 I 0.000
ENSLOCG00000011584 Lepisosteus oculatus ENSLOCG00000011584 I 0.000
ENSLACG00000014572 Latimeria chalumnae ENSLACG00000014572 I 0.000
ENSLACG00000006364 Latimeria chalumnae ENSLACG00000006364 I 0.000
ENSGMOG00000008854 Gadus morhua ENSGMOG00000008854 I 0.000
ENSGMOG00000001704 Gadus morhua ENSGMOG00000001704 I 0.000
ZNF281 Gorilla gorilla ENSGGOG00000010349 I 0.000
znf281a Gasterosteus aculeatus ENSGACG00000009536 I 0.000
znf281b Gasterosteus aculeatus ENSGACG00000006858 I 0.000
ZNF281 Anolis carolinensis ENSACAG00000006286 I 0.000