Bo7g117880 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g117880 T267531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.721 0.817
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.708 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g117880.1 Myb 39 85
Bo7g117880.1 Myb 91 136

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0008_21 Arabidopsis lyrata Al_scaffold_0008_21 I 0.000
Aquca_005_00325 Aquilegia coerulea Aquca_005_00325 N 0.000
Bo2g133550 Brassica oleracea Bo2g133550 I 0.000
Bostr.14419s0059 Boechera stricta Bostr.14419s0059 I 0.000
Bra022149 Brassica rapa Bra022149 I 0.000
Cagra.15822s0012 Capsella grandiflora Cagra.15822s0012 I 0.000
Carubv10027995m.g Capsella rubella Carubv10027995m.g I 0.000
Ca_07908 Cicer arietinum Ca_07908 N 0.000
Cla009202 Citrullus lanatus Cla009202 N 0.000
Cucsa.180580 Cucumis sativus Cucsa.180580 N 0.000
evm.TU.supercontig_27.230 Carica papaya evm.TU.supercontig_27.230 N 0.000
GLYMA09G01670 Glycine max GLYMA09G01670 N 0.000
GLYMA15G12591 Glycine max GLYMA15G12591 N 0.000
Gorai.010G248600 Gossypium raimondii Gorai.010G248600 N 0.000
LjSGA_128947.1 Lotus japonicus LjSGA_128947.1 N 0.000
MTR_2g026725 Medicago truncatula MTR_2g026725 I 0.000
PGSC0003DMG400013300 Solanum tuberosum PGSC0003DMG400013300 N 0.000
Solyc11g012720.1 Solanum lycopersicum Solyc11g012720.1 N 0.000
TCM_030445 Theobroma cacao TCM_030445 N 0.000
VIT_00s0956g00030 Vitis vinifera VIT_00s0956g00030 N 0.000