Bo8g049720 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo8g049720 T267544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.786 0.898
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.786 0.898
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.711 0.750
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.681 0.739
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.681 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g049720.1 Myb 2 44
Bo8g049720.1 Myb 50 95

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra021033 Brassica rapa Bra021033 I 0.863
Bo1g017860 Brassica oleracea Bo1g017860 I 0.835
Bra040181 Brassica rapa Bra040181 I 0.835
MYB39 Arabidopsis thaliana AT4G17785 D 0.786
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.786
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.775
Bra012641 Brassica rapa Bra012641 I 0.770
MYB39 Arabidopsis lyrata fgenesh2_kg.7__2528__AT4G17785.1 I 0.769
Carubv10006864m.g Capsella rubella Carubv10006864m.g I 0.766
Cagra.3356s0071 Capsella grandiflora Cagra.3356s0071 I 0.766
Bo7g105430 Brassica oleracea Bo7g105430 I 0.744
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.721
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.717
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.715
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.714
TCM_030009 Theobroma cacao TCM_030009 I 0.711
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.711
Cla001360 Citrullus lanatus Cla001360 I 0.711
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.711
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.711
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.711
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.711
Pm009892 Prunus mume Pm009892 I 0.711
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.711
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.711
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.711
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.711
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.711
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.711
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.711
MDP0000492221 Malus domestica MDP0000492221 I 0.711
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.711
mgf018114m Mimulus guttatus mgf018114m I 0.711
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.711
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.711
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.711
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.711
Bra029553 Brassica rapa Bra029553 I 0.711
Bo9g076410 Brassica oleracea Bo9g076410 I 0.711
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.710
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.707
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.707
Ca_00232 Cicer arietinum Ca_00232 I 0.698
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.698
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.698
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.698
MTR_4g091490 Medicago truncatula MTR_4g091490 I 0.698
Bra038774 Brassica rapa Bra038774 I 0.692
ATMYB102 Arabidopsis lyrata fgenesh2_kg.7__2173__AT4G21440.1 I 0.692
Cagra.2455s0004 Capsella grandiflora Cagra.2455s0004 I 0.692
Bostr.10689s0089 Boechera stricta Bostr.10689s0089 I 0.692
Carubv10004873m.g Capsella rubella Carubv10004873m.g I 0.692
Thhalv10027571m.g Eutrema salsugineum Thhalv10027571m.g I 0.692
ATMYB102 Arabidopsis thaliana AT4G21440 I 0.692
Bo3g162580 Brassica oleracea Bo3g162580 I 0.692
Bra020892 Brassica rapa Bra020892 I 0.692
Ca_22021 Cicer arietinum Ca_22021 I 0.691
cassava41325.m1 Manihot esculenta cassava41325.m1 I 0.690
Bo7g107420 Brassica oleracea Bo7g107420 I 0.688
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.687
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.687
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.687
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.684
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.683
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.683
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.683
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.682
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.681
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I 0.681
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I 0.681
Carubv10001366m.g Capsella rubella Carubv10001366m.g I 0.681
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.681
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.681
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.680
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.680
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.680
Solyc08g076710.2 Solanum lycopersicum Solyc08g076710.2 I 0.677
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.667
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.667
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.667
OBART04G23680 Oryza barthii OBART04G23680 I 0.667
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.667
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.667
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.667
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.667
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.667
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.667
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.667
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.667
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.667
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.667
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.667
Si030273m.g Setaria italica Si030273m.g I 0.667
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.667
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.667
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.667
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.667
OS02G0695200 Oryza sativa OS02G0695200 I 0.667
OS04G0594100 Oryza sativa OS04G0594100 I 0.667
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.667
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.667
OB02G35920 Oryza brachyantha OB02G35920 I 0.667
Cla019747 Citrullus lanatus Cla019747 I 0.667
OBART02G28790 Oryza barthii OBART02G28790 I 0.667
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.667
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.667
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.667
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.666
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.666
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.666
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.666
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.664
Lus10018418.g Linum usitatissimum Lus10018418.g I 0.664
Ca_11494 Cicer arietinum Ca_11494 I 0.664
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.663
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.663
Si010384m.g Setaria italica Si010384m.g I 0.663
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.662
Bo1g024170 Brassica oleracea Bo1g024170 I 0.662
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.662
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.662
Bra013526 Brassica rapa Bra013526 I 0.662
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.661
30054.m000809 Ricinus communis 30054.m000809 I 0.661