CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo8g106700
(
Brassica oleracea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bo8g106700
T267586_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.751
0.915
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo8g106700.1
Myb
25
76
RLKWTPELHQNFVHAVDMLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Brassica oleracea
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra026818
Brassica rapa
Bra026818
I
0.909
Thhalv10004791m.g
Eutrema salsugineum
Thhalv10004791m.g
I
0.793
Bra026618
Brassica rapa
Bra026618
I
0.793
Bo7g080160
Brassica oleracea
Bo7g080160
I
0.787
Bra024836
Brassica rapa
Bra024836
I
0.787
Bo2g134900
Brassica oleracea
Bo2g134900
I
0.786
Bo9g071530
Brassica oleracea
Bo9g071530
I
0.783
Cagra.3501s0036
Capsella grandiflora
Cagra.3501s0036
I
0.751
Bostr.24340s0004
Boechera stricta
Bostr.24340s0004
I
0.751
Carubv10010057m.g
Capsella rubella
Carubv10010057m.g
I
0.751
fgenesh2_kg.1__1592__AT1G14600.1
Arabidopsis lyrata
fgenesh2_kg.1__1592__AT1G14600.1
I
0.751
Bra026202
Brassica rapa
Bra026202
I
0.751
AT1G14600
Arabidopsis thaliana
AT1G14600
D
0.751
Bo5g019810
Brassica oleracea
Bo5g019810
I
0.751
Gorai.010G181100
Gossypium raimondii
Gorai.010G181100
I
0.746
Thhalv10008620m.g
Eutrema salsugineum
Thhalv10008620m.g
I
0.736
fgenesh2_kg.5__121__AT2G02060.1
Arabidopsis lyrata
fgenesh2_kg.5__121__AT2G02060.1
I
0.733
Bostr.0556s0031
Boechera stricta
Bostr.0556s0031
I
0.733
Cagra.0549s0004
Capsella grandiflora
Cagra.0549s0004
I
0.733
Carubv10017538m.g
Capsella rubella
Carubv10017538m.g
I
0.733
AT2G02060
Arabidopsis thaliana
AT2G02060
I
0.733
SapurV1A.3361s0010
Salix purpurea
SapurV1A.3361s0010
I
0.728
TCM_030248
Theobroma cacao
TCM_030248
I
0.728
POPTR_0004s01060
Populus trichocarpa
POPTR_0004s01060
I
0.728
SapurV1A.0429s0100
Salix purpurea
SapurV1A.0429s0100
I
0.728
BRADI3G51410
Brachypodium distachyon
BRADI3G51410
I
0.722
cassava27240.m1
Manihot esculenta
cassava27240.m1
I
0.721
Gorai.002G169300
Gossypium raimondii
Gorai.002G169300
I
0.721
Eucgr.B02627
Eucalyptus grandis
Eucgr.B02627
I
0.721
Gorai.009G329400
Gossypium raimondii
Gorai.009G329400
I
0.719
VIT_13s0067g01500
Vitis vinifera
VIT_13s0067g01500
I
0.717
POPTR_0021s00430
Populus trichocarpa
POPTR_0021s00430
I
0.716
GSMUA_Achr4G25920_001
Musa acuminata
GSMUA_Achr4G25920_001
I
0.713
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.710
29842.m003572
Ricinus communis
29842.m003572
I
0.706
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.705
TCM_011166
Theobroma cacao
TCM_011166
I
0.703
cassava20298.m1
Manihot esculenta
cassava20298.m1
I
0.703
AMTR_s00044p00042560
Amborella trichopoda
AMTR_s00044p00042560
I
0.703
VIT_01s0137g00050
Vitis vinifera
VIT_01s0137g00050
I
0.703
Aquca_002_01368
Aquilegia coerulea
Aquca_002_01368
I
0.703
SapurV1A.0203s0150
Salix purpurea
SapurV1A.0203s0150
I
0.703
GSMUA_Achr11G01510_001
Musa acuminata
GSMUA_Achr11G01510_001
I
0.703
SapurV1A.0015s0960
Salix purpurea
SapurV1A.0015s0960
I
0.703
evm.TU.supercontig_2.82
Carica papaya
evm.TU.supercontig_2.82
I
0.703
POPTR_0010s10990
Populus trichocarpa
POPTR_0010s10990
I
0.703
GSMUA_AchrUn_randomG06480_001
Musa acuminata
GSMUA_AchrUn_randomG06480_001
I
0.703
PGSC0003DMG400029440
Solanum tuberosum
PGSC0003DMG400029440
I
0.703
GSMUA_Achr5G19200_001
Musa acuminata
GSMUA_Achr5G19200_001
I
0.703
29780.m001368
Ricinus communis
29780.m001368
I
0.703
GSMUA_Achr2G11010_001
Musa acuminata
GSMUA_Achr2G11010_001
I
0.703
estExt_fgenesh1_pg.C_550102
Physcomitrella patens
estExt_fgenesh1_pg.C_550102
I
0.702
Eucgr.D01346
Eucalyptus grandis
Eucgr.D01346
I
0.700
GRMZM2G106185
Zea mays
GRMZM2G106185
I
0.699
gene00600-v1.0-hybrid
Fragaria vesca
gene00600-v1.0-hybrid
I
0.699
POPTR_0008s14140
Populus trichocarpa
POPTR_0008s14140
I
0.696
Cla009858
Citrullus lanatus
Cla009858
I
0.691
MDP0000196504
Malus domestica
MDP0000196504
I
0.691
MDP0000214282
Malus domestica
MDP0000214282
I
0.691
Cucsa.047000
Cucumis sativus
Cucsa.047000
I
0.691
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.688
Ca_05422
Cicer arietinum
Ca_05422
I
0.688
MTR_1g112370
Medicago truncatula
MTR_1g112370
I
0.688
GLYMA20G00861
Glycine max
GLYMA20G00861
I
0.688
GLYMA20G24290
Glycine max
GLYMA20G24290
I
0.688
GLYMA07G19585
Glycine max
GLYMA07G19585
I
0.688
PK23854.1
Cannabis sativa
PK23854.1
I
0.688
chr5.LjT14K23.60.nc
Lotus japonicus
chr5.LjT14K23.60.nc
I
0.688
orange1.1g020303m.g
Citrus sinensis
orange1.1g020303m.g
I
0.688
MTR_0223s0040
Medicago truncatula
MTR_0223s0040
I
0.688
Cla017202
Citrullus lanatus
Cla017202
I
0.688
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.688
Ciclev10005466m.g
Citrus clementina
Ciclev10005466m.g
I
0.688
Ca_14800
Cicer arietinum
Ca_14800
I
0.688
SELMODRAFT_438636
Selaginella moellendorffii
SELMODRAFT_438636
I
0.684
SELMODRAFT_426960
Selaginella moellendorffii
SELMODRAFT_426960
I
0.684
SELMODRAFT_422768
Selaginella moellendorffii
SELMODRAFT_422768
I
0.684
SELMODRAFT_414222
Selaginella moellendorffii
SELMODRAFT_414222
I
0.684
Ciclev10032941m.g
Citrus clementina
Ciclev10032941m.g
I
0.683
orange1.1g029903m.g
Citrus sinensis
orange1.1g029903m.g
I
0.683
PDK_20s1498711g001
Phoenix dactylifera
PDK_20s1498711g001
I
0.683
Ciclev10011992m.g
Citrus clementina
Ciclev10011992m.g
I
0.682
MDP0000234120
Malus domestica
MDP0000234120
I
0.682
orange1.1g017464m.g
Citrus sinensis
orange1.1g017464m.g
I
0.682
MDP0000321302
Malus domestica
MDP0000321302
I
0.682
mgf023762m
Mimulus guttatus
mgf023762m
I
0.677
Sb05g000480
Sorghum bicolor
Sb05g000480
I
0.676
Bostr.7199s0006
Boechera stricta
Bostr.7199s0006
I
0.675
Cagra.4137s0009
Capsella grandiflora
Cagra.4137s0009
I
0.675
Bo2g104640
Brassica oleracea
Bo2g104640
I
0.675
AT4G04605
Arabidopsis thaliana
AT4G04605
I
0.675
evm.TU.supercontig_2794.2
Carica papaya
evm.TU.supercontig_2794.2
I
0.675
Carubv10003097m.g
Capsella rubella
Carubv10003097m.g
I
0.675
Solyc02g080860.1
Solanum lycopersicum
Solyc02g080860.1
I
0.675
Aquca_066_00001
Aquilegia coerulea
Aquca_066_00001
I
0.672
Ca_00645
Cicer arietinum
Ca_00645
I
0.670
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.670
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.670
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.670
OLONG_000346
Oryza longistaminata
OLONG_000346
I
0.669
OGLUM02G28020
Oryza glumaepatula
OGLUM02G28020
I
0.669
OBART02G27470
Oryza barthii
OBART02G27470
I
0.669
LPERR02G22340
Leersia perrieri
LPERR02G22340
I
0.669
ORUFI02G28930
Oryza rufipogon
ORUFI02G28930
I
0.669
OMERI02G26760
Oryza meridionalis
OMERI02G26760
I
0.669
ONIVA02G30300
Oryza nivara
ONIVA02G30300
I
0.669
ORGLA02G0236600
Oryza glaberrima
ORGLA02G0236600
I
0.669
BGIOSGA008790
Oryza indica
BGIOSGA008790
I
0.669
OPUNC02G25130
Oryza punctata
OPUNC02G25130
I
0.669
AMTR_s00037p00221530
Amborella trichopoda
AMTR_s00037p00221530
I
0.668
Thhalv10017090m.g
Eutrema salsugineum
Thhalv10017090m.g
I
0.668
fgenesh2_pg.scaffold_137000062
Physcomitrella patens
fgenesh2_pg.scaffold_137000062
I
0.668
Pm014775
Prunus mume
Pm014775
I
0.668
Lus10007279.g
Linum usitatissimum
Lus10007279.g
I
0.667
LPERR03G02180
Leersia perrieri
LPERR03G02180
I
0.664
LPERR10G13190
Leersia perrieri
LPERR10G13190
I
0.664
Sb01g048420
Sorghum bicolor
Sb01g048420
I
0.664
Si039234m.g
Setaria italica
Si039234m.g
I
0.664
GRMZM5G887276
Zea mays
GRMZM5G887276
I
0.664
BGIOSGA031479
Oryza indica
BGIOSGA031479
I
0.664
Solyc04g008480.1
Solanum lycopersicum
Solyc04g008480.1
I
0.664
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.664
Pavir.Ib00180
Panicum virgatum
Pavir.Ib00180
I
0.664
BGIOSGA011527
Oryza indica
BGIOSGA011527
I
0.664
Pavir.Ia04483
Panicum virgatum
Pavir.Ia04483
I
0.664
Traes_1BL_E2629CBC1
Triticum aestivum
Traes_1BL_E2629CBC1
I
0.664
OBART10G17270
Oryza barthii
OBART10G17270
I
0.664
OMERI03G02220
Oryza meridionalis
OMERI03G02220
I
0.664
OLONG_011732
Oryza longistaminata
OLONG_011732
I
0.664
OB03G12320
Oryza brachyantha
OB03G12320
I
0.664
OMERI10G13750
Oryza meridionalis
OMERI10G13750
I
0.664
ONIVA03G01980
Oryza nivara
ONIVA03G01980
I
0.664
OPUNC10G15550
Oryza punctata
OPUNC10G15550
I
0.664
OPUNC03G02160
Oryza punctata
OPUNC03G02160
I
0.664
ONIVA10G19340
Oryza nivara
ONIVA10G19340
I
0.664
Si036127m.g
Setaria italica
Si036127m.g
I
0.664
ORGLA10G0122800
Oryza glaberrima
ORGLA10G0122800
I
0.664
OLONG_004539
Oryza longistaminata
OLONG_004539
I
0.664
ORUFI10G18320
Oryza rufipogon
ORUFI10G18320
I
0.664
ORUFI03G02110
Oryza rufipogon
ORUFI03G02110
I
0.664
OBART03G02370
Oryza barthii
OBART03G02370
I
0.664
OGLUM03G02310
Oryza glumaepatula
OGLUM03G02310
I
0.664
OB10G24340
Oryza brachyantha
OB10G24340
I
0.664
ORGLA03G0021400
Oryza glaberrima
ORGLA03G0021400
I
0.664
Eucgr.A02031
Eucalyptus grandis
Eucgr.A02031
I
0.662
Pm010236
Prunus mume
Pm010236
I
0.662
mgf019744m
Mimulus guttatus
mgf019744m
I
0.662
GRMZM2G090230
Zea mays
GRMZM2G090230
I
0.661
Cucsa.277160
Cucumis sativus
Cucsa.277160
I
0.661