Bra001917 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra001917 T267704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH

DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.848 0.903
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001917.1-P Myb 10 57
Bra001917.1-P Myb 63 108

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
klu-2 Caenorhabditis elegans WBGene00022592 D 0.000
CBG12610 Caenorhabditis briggsae CBG12610 I 0.000
TCNE_0000622401 Toxocara canis TCNE_0000622401 I 0.000
L893_g30492 Steinernema glaseri L893_g30492 I 0.000
L889_g28325 Steinernema feltiae L889_g28325 I 0.000
L596_g11489 Steinernema carpocapsae L596_g11489 I 0.000
HPLM_0001133101 Haemonchus placei HPLM_0001133101 I 0.000
HCOI01254700 Haemonchus contortus HCOI01254700 I 0.000
TELCIR_01018 Teladorsagia circumcincta TELCIR_01018 I 0.000
BXY_0680200 Bursaphelenchus xylophilus BXY_0680200 I 0.000
ASU_05504 Ascaris suum ASU_05504 I 0.000
CBN10213 Caenorhabditis brenneri CBN10213 I 0.000
CBN19187 Caenorhabditis brenneri CBN19187 I 0.000
CJA33261 Caenorhabditis japonica CJA33261 I 0.000
CRE07023 Caenorhabditis remanei CRE07023 I 0.000
ANCCAN_17930 Ancylostoma caninum ANCCAN_17930 I 0.000
PPA04971 Pristionchus pacificus PPA04971 N 0.000
RSKR_0000033200 Rhabditophanes kr3021 RSKR_0000033200 N 0.000
scaffold607-EXSNAP2012.9 Pristionchus exspectatus scaffold607-EXSNAP2012.9 N 0.000
GPLIN_001154300 Globodera pallida GPLIN_001154300 N 0.000
GPLIN_000062600 Globodera pallida GPLIN_000062600 N 0.000