Bra006811 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra006811 T267779_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.819 0.871
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.819 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra006811.1-P Myb 14 62
Bra006811.1-P Myb 68 113

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

477 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L898_g21763 Steinernema monticolum L898_g21763 I 0.000
L892_g14830 Steinernema scapterisci L892_g14830 N 0.000
SPAL_0000505500 Strongyloides papillosus SPAL_0000505500 N 0.000
SVE_0249400 Strongyloides venezuelensis SVE_0249400 N 0.000