Bra010085 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra010085 T267825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.898 0.957
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.898 0.957
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.897 0.978
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.897 0.978
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.870 0.968
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.870 0.968
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.861 0.925
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.843 0.925
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.843 0.925
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010085.1-P Myb 14 61
Bra010085.1-P Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

310 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006742 Ailuropoda melanoleuca ENSAMEG00000006742 I 0.000
Alligator_sinensis_CCG009029.1 Alligator sinensis Alligator_sinensis_CCG009029.1 I 0.000
Alligator_sinensis_CCG009029.2 Alligator sinensis Alligator_sinensis_CCG009029.2 I 0.000
ENSAPLG00000007702 Anas platyrhynchos ENSAPLG00000007702 I 0.000
NFAT5 Anolis carolinensis ENSACAG00000003530 I 0.000
Afo_R007438 Aptenodytes forsteri Afo_R007438 I 0.000
ENSAMXG00000013845 Astyanax mexicanus ENSAMXG00000013845 I 0.000
ENSP00000396538-D1 Bos grunniens ENSP00000396538-D1 I 0.000
NFAT5 Bos taurus ENSBTAG00000013412 I 0.000
e_gw.69.170.1 Branchiostoma floridae e_gw.69.170.1 I 0.000
Brh_R009705 Buceros rhinoceros Brh_R009705 I 0.000
NFAT5 Callithrix jacchus ENSCJAG00000015262 I 0.000
Aan_R009162 Calypte anna Aan_R009162 I 0.000
NFAT5 Canis familiaris ENSCAFG00000020254 I 0.000
NFAT5 Cavia porcellus ENSCPOG00000012425 I 0.000
Cmyd_10008332 Chelonia mydas Cmyd_10008332 I 0.000
ENSCSAG00000004149 Chlorocebus sabaeus ENSCSAG00000004149 I 0.000
NFAT5 Choloepus hoffmanni ENSCHOG00000005255 I 0.000
nfat5b Danio rerio ENSDARG00000102556 I 0.000
nfat5a Danio rerio ENSDARG00000020872 I 0.000
NFAT5 Equus caballus ENSECAG00000010266 I 0.000
NFAT5 Felis catus ENSFCAG00000002956 I 0.000
ENSFALG00000002754 Ficedula albicollis ENSFALG00000002754 I 0.000
ENSGMOG00000002563 Gadus morhua ENSGMOG00000002563 I 0.000
ENSGMOG00000004594 Gadus morhua ENSGMOG00000004594 I 0.000
ENSGALG00000000671 Gallus gallus ENSGALG00000000671 D 0.000
ENSGACG00000012216 Gasterosteus aculeatus ENSGACG00000012216 I 0.000
nfat5b Gasterosteus aculeatus ENSGACG00000015747 I 0.000
Gfo_R000557 Geospiza fortis Gfo_R000557 I 0.000
NFAT5 Homo sapiens ENSG00000102908 D 0.000
ENSSTOG00000020478 Ictidomys tridecemlineatus ENSSTOG00000020478 I 0.000
ENSLACG00000003245 Latimeria chalumnae ENSLACG00000003245 I 0.000
ENSLOCG00000003985 Lepisosteus oculatus ENSLOCG00000003985 I 0.000
NFAT5 Loxodonta africana ENSLAFG00000008964 I 0.000
ENSP00000396538 Macaca fascicularis ENSP00000396538 I 0.000
NFAT5 Macaca mulatta ENSMMUG00000018255 I 0.000
NFAT5 Meleagris gallopavo ENSMGAG00000008624 I 0.000
NFAT5 Monodelphis domestica ENSMODG00000002743 I 0.000
ENSMPUG00000007412 Mustela putorius furo ENSMPUG00000007412 I 0.000
Nfat5 Mus musculus ENSMUSG00000003847 I 0.000
Myotis_brandtii_NFAT5_10022449 Myotis brandtii Myotis_brandtii_NFAT5_10022449 I 0.000
NFAT5 Myotis lucifugus ENSMLUG00000006619 I 0.000
ENSNLEG00000005522 Nomascus leucogenys ENSNLEG00000005522 I 0.000
Ogr16826 Ophisaurus gracilis Ogr16826 I 0.000
ENSONIG00000005943 Oreochromis niloticus ENSONIG00000005943 I 0.000
ENSONIG00000014846 Oreochromis niloticus ENSONIG00000014846 I 0.000
NFAT5 Ornithorhynchus anatinus ENSOANG00000002367 I 0.000
NFAT5 Oryctolagus cuniculus ENSOCUG00000004386 I 0.000
nfat5a Oryzias latipes ENSORLG00000010349 I 0.000
nfat5b Oryzias latipes ENSORLG00000007600 I 0.000
ENSOARG00000003591 Ovis aries ENSOARG00000003591 I 0.000
NFAT5 Pan troglodytes ENSPTRG00000008283 I 0.000
ENSPANG00000009863 Papio anubis ENSPANG00000009863 I 0.000
ENSPSIG00000011812 Pelodiscus sinensis ENSPSIG00000011812 I 0.000
ENSPFOG00000013180 Poecilia formosa ENSPFOG00000013180 I 0.000
ENSPFOG00000017540 Poecilia formosa ENSPFOG00000017540 I 0.000
Pvit_16277 Pogona vitticeps Pvit_16277 I 0.000
ENSPPYG00000007507 Pongo abelii ENSPPYG00000007507 I 0.000
NFAT5 Pteropus vampyrus ENSPVAG00000013326 I 0.000
Nfat5 Rattus norvegicus ENSRNOG00000011879 I 0.000
ENSSHAG00000014917 Sarcophilus harrisii ENSSHAG00000014917 I 0.000
NFAT5 Sorex araneus ENSSARG00000011900 I 0.000
NFAT5 Sus scrofa ENSSSCG00000002755 I 0.000
NFAT5 Taeniopygia guttata ENSTGUG00000008104 I 0.000
nfat5b Takifugu rubripes ENSTRUG00000017537 I 0.000
nfat5a Takifugu rubripes ENSTRUG00000011018 I 0.000
ENSTSYG00000001907 Tarsius syrichta ENSTSYG00000001907 I 0.000
ENSTNIG00000009352 Tetraodon nigroviridis ENSTNIG00000009352 I 0.000
nfat5a Tetraodon nigroviridis ENSTNIG00000012108 I 0.000
NFAT5 Tupaia belangeri ENSTBEG00000002347 I 0.000
NFAT5 Tursiops truncatus ENSTTRG00000010017 I 0.000
Tal_R006778 Tyto alba Tal_R006778 I 0.000
NFAT5 Vicugna pacos ENSVPAG00000003995 I 0.000
nfat5 Xenopus tropicalis XB-GENE-6069990 I 0.000
ENSXMAG00000009207 Xiphophorus maculatus ENSXMAG00000009207 I 0.000
ENSXMAG00000003183 Xiphophorus maculatus ENSXMAG00000003183 I 0.000