CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra012919
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra012919
T267851_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.700
0.804
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR
YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.700
0.804
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.700
0.804
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.700
0.804
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra012919.1-P
Myb
5
56
KHKWTPEEEEALMAGVLEHGIGKWRSILGNPEYSSVLHSRSNVDLKDKWRNI
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy