Bra020390 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra020390 T267924_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN

NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.852 0.936
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.711 0.851
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.695 0.830
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.671 0.809
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.661 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra020390.1-P Myb 201 251

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

312 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action