Bra024760 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra024760 T267972_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.766 0.927
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.766 0.927
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.761 0.878
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.761 0.878
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.681 0.793
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.670 0.768
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra024760.1-P Myb 16 63
Bra024760.1-P Myb 69 103

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_189431 Agaricus bisporus AGABI2DRAFT_189431 N 0.000
CC1G_06539 Coprinopsis cinerea CC1G_06539 N 0.000
fgenesh1_pg.C_scaffold_13000030 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_13000030 N 0.000
FOMPIDRAFT_1115920 Fomitopsis pinicola FOMPIDRAFT_1115920 N 0.000
GALMADRAFT_109196 Galerina marginata GALMADRAFT_109196 N 0.000
Genemark.209_g Heterobasidion annosum Genemark.209_g N 0.000
GLOTRDRAFT_112955 Gloeophyllum trabeum GLOTRDRAFT_112955 N 0.000
HETIRDRAFT_307860 Heterobasidion irregulare HETIRDRAFT_307860 N 0.000
JAAARDRAFT_53352 Jaapia argillacea JAAARDRAFT_53352 N 0.000
K443DRAFT_673496 Laccaria amethystina K443DRAFT_673496 N 0.000
LACBIDRAFT_301156 Laccaria bicolor LACBIDRAFT_301156 N 0.000
M378DRAFT_6232 Amanita muscaria M378DRAFT_6232 N 0.000
M404DRAFT_134354 Pisolithus tinctorius M404DRAFT_134354 N 0.000
M413DRAFT_22142 Hebeloma cylindrosporum M413DRAFT_22142 N 0.000
Moror_16007 Moniliophthora roreri Moror_16007 N 0.000
PAXRUDRAFT_822699 Paxillus rubicundulus PAXRUDRAFT_822699 N 0.000
PHACADRAFT_204842 Phanerochaete carnosa PHACADRAFT_204842 N 0.000
PHLGIDRAFT_76399 Phlebiopsis gigantea PHLGIDRAFT_76399 N 0.000
PISMIDRAFT_6278 Pisolithus microcarpus PISMIDRAFT_6278 N 0.000
PLEOSDRAFT_155843 Pleurotus ostreatus PLEOSDRAFT_155843 N 0.000
SCHCODRAFT_104000 Schizophyllum commune SCHCODRAFT_104000 N 0.000
SERLA73DRAFT_68203 Serpula lacrymans SERLA73DRAFT_68203 N 0.000