Bra025337 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra025337 T267983_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025337.1-P Myb 14 61
Bra025337.1-P Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo7g091360 Brassica oleracea Bo7g091360 N 0.909
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.909
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.892
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.892
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.892
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.892
MYB35 Arabidopsis thaliana AT3G28470 N 0.845
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.786
MDP0000258046 Malus domestica MDP0000258046 N 0.746
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.742
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.741
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.739
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.735
Pm015813 Prunus mume Pm015813 N 0.734
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.730
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.730
TCM_045715 Theobroma cacao TCM_045715 N 0.728
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.728
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.727
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.722
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.722
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.721
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.720
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.718
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.718
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.718
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.717
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.717
Ca_10555 Cicer arietinum Ca_10555 N 0.717
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.714
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.709
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.708
TCM_018082 Theobroma cacao TCM_018082 N 0.702
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.698
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.679
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.679
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.679
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.675
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.673
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.673
mgf012871m Mimulus guttatus mgf012871m I 0.671
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.670
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.667