Bra033726 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra033726 T268078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.729 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra033726.1-P Myb 138 188

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g067200 Brassica oleracea Bo7g067200 I 0.909
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.847
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.847
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.847
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.847
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.847
GLK2 Arabidopsis thaliana AT5G44190 I 0.847
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.771
MTR_4g078810 Medicago truncatula MTR_4g078810 I 0.738
PGSC0003DMG400021857 Solanum tuberosum PGSC0003DMG400021857 I 0.736
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.729
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.729
Cla003791 Citrullus lanatus Cla003791 I 0.729
GPRI1 Arabidopsis thaliana AT2G20570 D 0.729
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.729
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.729
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.729
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.729
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.729
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.729
GLYMA12G13430 Glycine max GLYMA12G13430 I 0.727
PGSC0003DMG400009378 Solanum tuberosum PGSC0003DMG400009378 I 0.727
MTR_2g090675 Medicago truncatula MTR_2g090675 I 0.727
GLYMA12G33430 Glycine max GLYMA12G33430 I 0.727
Ca_11268 Cicer arietinum Ca_11268 I 0.727
Ca_02452 Cicer arietinum Ca_02452 I 0.727
GLYMA13G37010 Glycine max GLYMA13G37010 I 0.727
Solyc07g053630.2 Solanum lycopersicum Solyc07g053630.2 I 0.727
GLYMA06G44330 Glycine max GLYMA06G44330 I 0.727
GPRI1 Vitis vinifera VIT_12s0028g03100 I 0.727
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.709
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.709
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.709
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.709
MDP0000225179 Malus domestica MDP0000225179 I 0.709
MDP0000526864 Malus domestica MDP0000526864 I 0.709
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.709
Pm014123 Prunus mume Pm014123 I 0.709
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.709
TCM_008193 Theobroma cacao TCM_008193 I 0.709
PK27491.1 Cannabis sativa PK27491.1 I 0.709
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.709
Bra036015 Brassica rapa Bra036015 I 0.709
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.709
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.709
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.709
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.709
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.709
29983.m003131 Ricinus communis 29983.m003131 I 0.709
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.709
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.709
chr3.CM0160.680.nd Lotus japonicus chr3.CM0160.680.nd I 0.705
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.696
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.696
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.693
mgf012846m Mimulus guttatus mgf012846m I 0.691
mgf007181m Mimulus guttatus mgf007181m I 0.691
mgf004257m Mimulus guttatus mgf004257m I 0.687
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.682
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I 0.680
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.676
PDK_20s1662851g001 Phoenix dactylifera PDK_20s1662851g001 I 0.676
29848.m004559 Ricinus communis 29848.m004559 I 0.669
Ca_09080 Cicer arietinum Ca_09080 I 0.669
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.669
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.669
Cla008926 Citrullus lanatus Cla008926 I 0.667
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.667
PK19826.1 Cannabis sativa PK19826.1 I 0.664
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.664
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.664
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.664
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.664
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.664
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.664
Pm014733 Prunus mume Pm014733 I 0.664