Bra036482 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra036482 T268117_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.744 0.936
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036482.1-P Myb 166 216

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra031129 Brassica rapa Bra031129 I 0.849
Bo7g003410 Brassica oleracea Bo7g003410 I 0.849
Bo8g102300 Brassica oleracea Bo8g102300 I 0.849
Gorai.008G155000 Gossypium raimondii Gorai.008G155000 I 0.813
Eucgr.A01857 Eucalyptus grandis Eucgr.A01857 I 0.813
TRAES3BF062500050CFD_g Triticum aestivum TRAES3BF062500050CFD_g I 0.802
MLOC_65876 Hordeum vulgare MLOC_65876 I 0.780
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.744
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.744
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.744
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.744
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.744
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.744
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.744
GPRI1 Arabidopsis thaliana AT2G20570 D 0.744
Cla003791 Citrullus lanatus Cla003791 I 0.744
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.744
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.744
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.739
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I 0.726
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.724
Pm014123 Prunus mume Pm014123 I 0.724
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.724
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.724
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.724
TCM_008193 Theobroma cacao TCM_008193 I 0.724
29983.m003131 Ricinus communis 29983.m003131 I 0.724
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.724
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.724
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.724
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.724
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.724
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.724
PK27491.1 Cannabis sativa PK27491.1 I 0.724
MDP0000526864 Malus domestica MDP0000526864 I 0.724
MDP0000225179 Malus domestica MDP0000225179 I 0.724
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.724
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.724
GLK2 Oryza sativa OS01G0239000 I 0.724
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.724
Aquca_051_00026 Aquilegia coerulea Aquca_051_00026 I 0.724
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.724
OMERI01G08840 Oryza meridionalis OMERI01G08840 I 0.724
ONIVA01G11450 Oryza nivara ONIVA01G11450 I 0.724
OPUNC01G08680 Oryza punctata OPUNC01G08680 I 0.724
GSMUA_Achr10G26160_001 Musa acuminata GSMUA_Achr10G26160_001 I 0.724
OGLUM01G10130 Oryza glumaepatula OGLUM01G10130 I 0.724
LPERR01G08320 Leersia perrieri LPERR01G08320 I 0.724
GSMUA_Achr7G11040_001 Musa acuminata GSMUA_Achr7G11040_001 I 0.724
ORUFI01G09620 Oryza rufipogon ORUFI01G09620 I 0.724
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.715
BRADI2G08287 Brachypodium distachyon BRADI2G08287 I 0.713
GLYMA13G37010 Glycine max GLYMA13G37010 I 0.706
Ca_02452 Cicer arietinum Ca_02452 I 0.706
MTR_2g090675 Medicago truncatula MTR_2g090675 I 0.706
GPRI1 Vitis vinifera VIT_12s0028g03100 I 0.706
GRMZM2G087804 Zea mays GRMZM2G087804 I 0.706
Ca_11268 Cicer arietinum Ca_11268 I 0.706
GLYMA12G33430 Glycine max GLYMA12G33430 I 0.706
Pavir.Eb00063 Panicum virgatum Pavir.Eb00063 I 0.706
PGSC0003DMG400009378 Solanum tuberosum PGSC0003DMG400009378 I 0.706
GLYMA06G44330 Glycine max GLYMA06G44330 I 0.706
Sb03g000400 Sorghum bicolor Sb03g000400 I 0.706
Solyc07g053630.2 Solanum lycopersicum Solyc07g053630.2 I 0.706
GLYMA12G13430 Glycine max GLYMA12G13430 I 0.706
mgf004257m Mimulus guttatus mgf004257m I 0.703
Pavir.Ea00014 Panicum virgatum Pavir.Ea00014 I 0.698
BGIOSGA022875 Oryza indica BGIOSGA022875 I 0.695
LPERR06G12880 Leersia perrieri LPERR06G12880 I 0.695
F775_20285 Aegilops tauschii F775_20285 I 0.695
GRMZM2G026833 Zea mays GRMZM2G026833 I 0.695
MLOC_43537 Hordeum vulgare MLOC_43537 I 0.695
Pavir.Db01285 Panicum virgatum Pavir.Db01285 I 0.695
BRADI1G43710 Brachypodium distachyon BRADI1G43710 I 0.695
OB06G22250 Oryza brachyantha OB06G22250 I 0.695
Si001336m.g Setaria italica Si001336m.g I 0.695
Si006400m.g Setaria italica Si006400m.g I 0.695
MTR_4g078810 Medicago truncatula MTR_4g078810 I 0.695
Sb10g008400 Sorghum bicolor Sb10g008400 I 0.695
OPUNC06G13180 Oryza punctata OPUNC06G13180 I 0.695
GLK1 Oryza sativa OS06G0348800 I 0.695
ORGLA06G0126200 Oryza glaberrima ORGLA06G0126200 I 0.695
Traes_7DL_58DDB90E3 Triticum aestivum Traes_7DL_58DDB90E3 I 0.695
ONIVA06G16920 Oryza nivara ONIVA06G16920 I 0.695
OBART03G02540 Oryza barthii OBART03G02540 I 0.695
OGLUM06G15080 Oryza glumaepatula OGLUM06G15080 I 0.695
ORUFI06G15000 Oryza rufipogon ORUFI06G15000 I 0.695
OMERI06G15340 Oryza meridionalis OMERI06G15340 I 0.695
GSMUA_Achr6G05850_001 Musa acuminata GSMUA_Achr6G05850_001 I 0.693
BGIOSGA002040 Oryza indica BGIOSGA002040 I 0.691
ORGLA01G0079000 Oryza glaberrima ORGLA01G0079000 I 0.691
PDK_20s1662851g001 Phoenix dactylifera PDK_20s1662851g001 I 0.691
chr3.CM0160.680.nd Lotus japonicus chr3.CM0160.680.nd I 0.685
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.675
OB01G18980 Oryza brachyantha OB01G18980 I 0.671
PGSC0003DMG400021857 Solanum tuberosum PGSC0003DMG400021857 I 0.663
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.662
GLYMA08G05165 Glycine max GLYMA08G05165 N 0.661