CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra037388
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra037388
T268123_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra037388.1-P
Myb
31
76
AVNMNQEEEDLICRMHKLVGNRWELIAGRIPGRTAEEVERFWVMKK
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g003750
Brassica oleracea
Bo9g003750
N
0.909
Thhalv10029104m.g
Eutrema salsugineum
Thhalv10029104m.g
N
0.771
Bostr.7365s0058
Boechera stricta
Bostr.7365s0058
N
0.750
Cagra.1372s0017
Capsella grandiflora
Cagra.1372s0017
N
0.736
Carubv10003403m.g
Capsella rubella
Carubv10003403m.g
N
0.736
LPERR01G19720
Leersia perrieri
LPERR01G19720
N
0.733
Bra000941
Brassica rapa
Bra000941
N
0.724
Bo3g054440
Brassica oleracea
Bo3g054440
N
0.724
Pavir.J30777
Panicum virgatum
Pavir.J30777
N
0.718
Pavir.Eb02165
Panicum virgatum
Pavir.Eb02165
N
0.718
Sb03g028170
Sorghum bicolor
Sb03g028170
N
0.718
MLOC_68772
Hordeum vulgare
MLOC_68772
N
0.718
GRMZM2G057955
Zea mays
GRMZM2G057955
N
0.718
Traes_3DL_30CF35BB3
Triticum aestivum
Traes_3DL_30CF35BB3
N
0.711
TRAES3BF020200120CFD_g
Triticum aestivum
TRAES3BF020200120CFD_g
N
0.711
TRIUR3_10842
Triticum urartu
TRIUR3_10842
N
0.711
Bo2g098940
Brassica oleracea
Bo2g098940
N
0.709
Bra008539
Brassica rapa
Bra008539
N
0.709
ETC3
Arabidopsis thaliana
AT4G01060
N
0.703
Bostr.5325s0057
Boechera stricta
Bostr.5325s0057
N
0.692
ETC1
Arabidopsis lyrata
Al_scaffold_0001_92
N
0.692
Carubv10011382m.g
Capsella rubella
Carubv10011382m.g
N
0.692
ETC1
Arabidopsis thaliana
AT1G01380
N
0.692
Cagra.1968s0081
Capsella grandiflora
Cagra.1968s0081
N
0.692
OPUNC01G23150
Oryza punctata
OPUNC01G23150
N
0.690
ETC3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002892
N
0.686
30169.m006531
Ricinus communis
30169.m006531
N
0.684
POPTR_0015s02310
Populus trichocarpa
POPTR_0015s02310
N
0.679
SapurV1A.0013s0580
Salix purpurea
SapurV1A.0013s0580
N
0.672
POPTR_0014s09200
Populus trichocarpa
POPTR_0014s09200
N
0.672
OLONG_010128
Oryza longistaminata
OLONG_010128
N
0.670
LPERR01G19750
Leersia perrieri
LPERR01G19750
N
0.670
BGIOSGA001192
Oryza indica
BGIOSGA001192
N
0.670
ORUFI01G25800
Oryza rufipogon
ORUFI01G25800
N
0.670
OBART01G22980
Oryza barthii
OBART01G22980
N
0.670
OGLUM01G26760
Oryza glumaepatula
OGLUM01G26760
N
0.670
Eucgr.E00851
Eucalyptus grandis
Eucgr.E00851
N
0.664
Thhalv10009233m.g
Eutrema salsugineum
Thhalv10009233m.g
N
0.664
evm.TU.supercontig_3.55
Carica papaya
evm.TU.supercontig_3.55
N
0.663
ORGLA01G0184700
Oryza glaberrima
ORGLA01G0184700
N
0.662
BGIOSGA001193
Oryza indica
BGIOSGA001193
N
0.662
OBART01G22950
Oryza barthii
OBART01G22950
N
0.662
OGLUM01G26700
Oryza glumaepatula
OGLUM01G26700
N
0.662
ORUFI01G25760
Oryza rufipogon
ORUFI01G25760
N
0.662