Bra039470 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra039470 T268147_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TRFL5
M02285_2.00
Arabidopsis thaliana
WGCCCTAN

NTAGGGCW
PBM
Weirauch et al.(2014)
pTH7099
0.763 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra039470.1-P Myb 344 393

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo5g146770 Brassica oleracea Bo5g146770 I 0.889
Thhalv10013531m.g Eutrema salsugineum Thhalv10013531m.g I 0.822
Bo9g134990 Brassica oleracea Bo9g134990 I 0.822
Al_scaffold_0008_2302 Arabidopsis lyrata Al_scaffold_0008_2302 I 0.804
AT5G58340 Arabidopsis thaliana AT5G58340 I 0.804
Bostr.7128s0187 Boechera stricta Bostr.7128s0187 I 0.789
TRFL5 Arabidopsis lyrata fgenesh2_kg.1__1721__AT1G15720.1 I 0.787
Cagra.2238s0052 Capsella grandiflora Cagra.2238s0052 I 0.771
Carubv10011791m.g Capsella rubella Carubv10011791m.g I 0.771
TRFL5 Arabidopsis thaliana AT1G15720 D 0.763
Thhalv10022421m.g Eutrema salsugineum Thhalv10022421m.g I 0.692