CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G71910
(
Brachypodium distachyon
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
BRADI1G71910
T268202_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN
NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.674
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G71910.1
Myb
18
69
RLRWTPALHRCFVHAIRSLGGQHRATPKRVLQLMGVGGLTISHVKSHLQQMY
Links
Other
Myb/SANT
family TFs
Other
Brachypodium distachyon
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ib00180
Panicum virgatum
Pavir.Ib00180
I
0.831
MLOC_56821
Hordeum vulgare
MLOC_56821
I
0.806
GLYMA20G24290
Glycine max
GLYMA20G24290
I
0.801
Traes_1BL_E2629CBC1
Triticum aestivum
Traes_1BL_E2629CBC1
I
0.796
TCM_011166
Theobroma cacao
TCM_011166
I
0.791
chr5.LjT14K23.60.nc
Lotus japonicus
chr5.LjT14K23.60.nc
I
0.783
OMERI03G02220
Oryza meridionalis
OMERI03G02220
I
0.778
GRMZM5G887276
Zea mays
GRMZM5G887276
I
0.778
OMERI10G13750
Oryza meridionalis
OMERI10G13750
I
0.778
OLONG_011732
Oryza longistaminata
OLONG_011732
I
0.778
Si036127m.g
Setaria italica
Si036127m.g
I
0.778
LPERR03G02180
Leersia perrieri
LPERR03G02180
I
0.778
OGLUM03G02310
Oryza glumaepatula
OGLUM03G02310
I
0.778
ORGLA03G0021400
Oryza glaberrima
ORGLA03G0021400
I
0.778
OGLUM10G17290
Oryza glumaepatula
OGLUM10G17290
I
0.778
OBART10G17270
Oryza barthii
OBART10G17270
I
0.778
OLONG_004539
Oryza longistaminata
OLONG_004539
I
0.778
Sb01g048420
Sorghum bicolor
Sb01g048420
I
0.778
ONIVA03G01980
Oryza nivara
ONIVA03G01980
I
0.778
OB10G24340
Oryza brachyantha
OB10G24340
I
0.778
ORUFI03G02110
Oryza rufipogon
ORUFI03G02110
I
0.778
OBART03G02370
Oryza barthii
OBART03G02370
I
0.778
BGIOSGA031479
Oryza indica
BGIOSGA031479
I
0.778
BGIOSGA011527
Oryza indica
BGIOSGA011527
I
0.778
OPUNC03G02160
Oryza punctata
OPUNC03G02160
I
0.778
LPERR10G13190
Leersia perrieri
LPERR10G13190
I
0.778
OB03G12320
Oryza brachyantha
OB03G12320
I
0.778
ORUFI10G18320
Oryza rufipogon
ORUFI10G18320
I
0.778
OPUNC10G15550
Oryza punctata
OPUNC10G15550
I
0.778
ONIVA10G19340
Oryza nivara
ONIVA10G19340
I
0.778
Pavir.Ia04483
Panicum virgatum
Pavir.Ia04483
I
0.778
ORGLA10G0122800
Oryza glaberrima
ORGLA10G0122800
I
0.778
GRMZM2G374986
Zea mays
GRMZM2G374986
I
0.762
SapurV1A.0015s0960
Salix purpurea
SapurV1A.0015s0960
I
0.756
POPTR_0008s14140
Populus trichocarpa
POPTR_0008s14140
I
0.756
GRMZM2G069525
Zea mays
GRMZM2G069525
I
0.755
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.747
Si039234m.g
Setaria italica
Si039234m.g
I
0.747
SapurV1A.3361s0010
Salix purpurea
SapurV1A.3361s0010
I
0.743
SapurV1A.0429s0100
Salix purpurea
SapurV1A.0429s0100
I
0.743
Ca_14800
Cicer arietinum
Ca_14800
I
0.741
Ca_05422
Cicer arietinum
Ca_05422
I
0.741
MTR_1g112370
Medicago truncatula
MTR_1g112370
I
0.741
GLYMA20G00861
Glycine max
GLYMA20G00861
I
0.741
GLYMA07G19585
Glycine max
GLYMA07G19585
I
0.741
MTR_0223s0040
Medicago truncatula
MTR_0223s0040
I
0.741
Ciclev10005466m.g
Citrus clementina
Ciclev10005466m.g
I
0.741
orange1.1g020303m.g
Citrus sinensis
orange1.1g020303m.g
I
0.741
Aquca_002_01368
Aquilegia coerulea
Aquca_002_01368
I
0.738
VIT_01s0137g00050
Vitis vinifera
VIT_01s0137g00050
I
0.738
GSMUA_Achr2G11010_001
Musa acuminata
GSMUA_Achr2G11010_001
I
0.738
evm.TU.supercontig_2.82
Carica papaya
evm.TU.supercontig_2.82
I
0.738
Gorai.002G169300
Gossypium raimondii
Gorai.002G169300
I
0.738
PDK_20s1474441g001
Phoenix dactylifera
PDK_20s1474441g001
I
0.738
SapurV1A.0203s0150
Salix purpurea
SapurV1A.0203s0150
I
0.738
Eucgr.B02627
Eucalyptus grandis
Eucgr.B02627
I
0.738
GSMUA_Achr11G01510_001
Musa acuminata
GSMUA_Achr11G01510_001
I
0.738
29780.m001368
Ricinus communis
29780.m001368
I
0.738
cassava27240.m1
Manihot esculenta
cassava27240.m1
I
0.738
GSMUA_AchrUn_randomG06480_001
Musa acuminata
GSMUA_AchrUn_randomG06480_001
I
0.738
cassava20298.m1
Manihot esculenta
cassava20298.m1
I
0.738
MDP0000234120
Malus domestica
MDP0000234120
I
0.735
PK23854.1
Cannabis sativa
PK23854.1
I
0.723
Ca_00645
Cicer arietinum
Ca_00645
I
0.720
PGSC0003DMG400029440
Solanum tuberosum
PGSC0003DMG400029440
I
0.720
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.720
GSMUA_Achr5G19200_001
Musa acuminata
GSMUA_Achr5G19200_001
I
0.720
Bostr.24340s0004
Boechera stricta
Bostr.24340s0004
I
0.720
POPTR_0010s10990
Populus trichocarpa
POPTR_0010s10990
I
0.720
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.720
MDP0000321302
Malus domestica
MDP0000321302
I
0.717
PDK_20s1498711g001
Phoenix dactylifera
PDK_20s1498711g001
I
0.715
SELMODRAFT_424890
Selaginella moellendorffii
SELMODRAFT_424890
I
0.715
SELMODRAFT_423935
Selaginella moellendorffii
SELMODRAFT_423935
I
0.715
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.711
Gorai.009G329400
Gossypium raimondii
Gorai.009G329400
I
0.711
Carubv10017538m.g
Capsella rubella
Carubv10017538m.g
I
0.709
Cagra.0549s0004
Capsella grandiflora
Cagra.0549s0004
I
0.709
Bostr.0556s0031
Boechera stricta
Bostr.0556s0031
I
0.709
AT2G02060
Arabidopsis thaliana
AT2G02060
I
0.709
VIT_13s0067g01500
Vitis vinifera
VIT_13s0067g01500
I
0.709
fgenesh2_kg.5__121__AT2G02060.1
Arabidopsis lyrata
fgenesh2_kg.5__121__AT2G02060.1
I
0.709
Bra026618
Brassica rapa
Bra026618
I
0.709
Bo2g134900
Brassica oleracea
Bo2g134900
I
0.709
Thhalv10004791m.g
Eutrema salsugineum
Thhalv10004791m.g
I
0.709
GSMUA_Achr4G25920_001
Musa acuminata
GSMUA_Achr4G25920_001
I
0.707
gene00600-v1.0-hybrid
Fragaria vesca
gene00600-v1.0-hybrid
I
0.705
Bo7g080160
Brassica oleracea
Bo7g080160
I
0.703
Bra024836
Brassica rapa
Bra024836
I
0.703
Cucsa.045140
Cucumis sativus
Cucsa.045140
I
0.702
LjT01P07.20.nd
Lotus japonicus
LjT01P07.20.nd
I
0.702
Cla014669
Citrullus lanatus
Cla014669
I
0.702
MDP0000312944
Malus domestica
MDP0000312944
I
0.699
Ciclev10032941m.g
Citrus clementina
Ciclev10032941m.g
I
0.697
orange1.1g029903m.g
Citrus sinensis
orange1.1g029903m.g
I
0.697
cassava11204.m1
Manihot esculenta
cassava11204.m1
I
0.697
MLOC_72013
Hordeum vulgare
MLOC_72013
I
0.695
F775_13531
Aegilops tauschii
F775_13531
I
0.695
OBART04G21930
Oryza barthii
OBART04G21930
I
0.695
TRIUR3_11585
Triticum urartu
TRIUR3_11585
I
0.695
OMERI04G18450
Oryza meridionalis
OMERI04G18450
I
0.695
LPERR04G17940
Leersia perrieri
LPERR04G17940
I
0.695
OLONG_016687
Oryza longistaminata
OLONG_016687
I
0.695
OB04G28940
Oryza brachyantha
OB04G28940
I
0.695
Pavir.J09702
Panicum virgatum
Pavir.J09702
I
0.695
Traes_5BL_0C6735099
Triticum aestivum
Traes_5BL_0C6735099
I
0.695
ORUFI04G23540
Oryza rufipogon
ORUFI04G23540
I
0.695
ONIVA04G20480
Oryza nivara
ONIVA04G20480
I
0.695
OGLUM04G21960
Oryza glumaepatula
OGLUM04G21960
I
0.695
OPUNC04G19690
Oryza punctata
OPUNC04G19690
I
0.695
ORGLA04G0189700
Oryza glaberrima
ORGLA04G0189700
I
0.695
Si011884m.g
Setaria italica
Si011884m.g
I
0.695
BGIOSGA016936
Oryza indica
BGIOSGA016936
I
0.695
OS04G0566600
Oryza sativa
OS04G0566600
I
0.695
Ciclev10029989m.g
Citrus clementina
Ciclev10029989m.g
I
0.692
Pm014775
Prunus mume
Pm014775
I
0.692
PRUPE_ppa023518mg
Prunus persica
PRUPE_ppa023518mg
I
0.692
orange1.1g041956m.g
Citrus sinensis
orange1.1g041956m.g
I
0.692
AMTR_s00044p00042560
Amborella trichopoda
AMTR_s00044p00042560
I
0.689
GSMUA_Achr7G03510_001
Musa acuminata
GSMUA_Achr7G03510_001
I
0.688
Pm010236
Prunus mume
Pm010236
I
0.687
mgf019744m
Mimulus guttatus
mgf019744m
I
0.687
Lus10029808.g
Linum usitatissimum
Lus10029808.g
I
0.686
Solyc02g080860.1
Solanum lycopersicum
Solyc02g080860.1
I
0.685
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.683
Pm009670
Prunus mume
Pm009670
I
0.683
29842.m003572
Ricinus communis
29842.m003572
I
0.683
Pavir.Gb01051
Panicum virgatum
Pavir.Gb01051
I
0.683
TCM_030248
Theobroma cacao
TCM_030248
I
0.683
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.683
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.683
Gorai.010G181100
Gossypium raimondii
Gorai.010G181100
I
0.683
CHLREDRAFT_196473
Chlamydomonas reinhardtii
CHLREDRAFT_196473
I
0.683
POPTR_0004s01060
Populus trichocarpa
POPTR_0004s01060
I
0.683
evm.TU.supercontig_2794.2
Carica papaya
evm.TU.supercontig_2794.2
I
0.683
MDP0000217637
Malus domestica
MDP0000217637
I
0.682
Cucsa.277160
Cucumis sativus
Cucsa.277160
I
0.681
mgf023762m
Mimulus guttatus
mgf023762m
I
0.681
Solyc04g008480.1
Solanum lycopersicum
Solyc04g008480.1
I
0.681
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.679
Ciclev10018145m.g
Citrus clementina
Ciclev10018145m.g
I
0.679
Sb06g025600
Sorghum bicolor
Sb06g025600
I
0.677
Eucgr.D01346
Eucalyptus grandis
Eucgr.D01346
I
0.677
SapurV1A.0042s0270
Salix purpurea
SapurV1A.0042s0270
I
0.677
estExt_fgenesh1_pg.C_550102
Physcomitrella patens
estExt_fgenesh1_pg.C_550102
I
0.676
SELMODRAFT_426960
Selaginella moellendorffii
SELMODRAFT_426960
I
0.676
SELMODRAFT_438636
Selaginella moellendorffii
SELMODRAFT_438636
I
0.676
Traes_4DS_99EC36CD4
Triticum aestivum
Traes_4DS_99EC36CD4
I
0.674
OB12G10410
Oryza brachyantha
OB12G10410
I
0.674
Traes_4AL_72ECC7747
Triticum aestivum
Traes_4AL_72ECC7747
I
0.674
cassava21831.m1
Manihot esculenta
cassava21831.m1
I
0.674
TCM_042189
Theobroma cacao
TCM_042189
I
0.674
SapurV1A.0905s0010
Salix purpurea
SapurV1A.0905s0010
I
0.674
PK26523.1
Cannabis sativa
PK26523.1
D
0.674
Gorai.009G112300
Gossypium raimondii
Gorai.009G112300
I
0.674
AMTR_s00021p00013790
Amborella trichopoda
AMTR_s00021p00013790
I
0.674
TCM_042463
Theobroma cacao
TCM_042463
I
0.674
F775_29879
Aegilops tauschii
F775_29879
I
0.674
TRIUR3_10881
Triticum urartu
TRIUR3_10881
I
0.674
PRUPE_ppa021540mg
Prunus persica
PRUPE_ppa021540mg
I
0.674
Pm018961
Prunus mume
Pm018961
I
0.674
Cla017202
Citrullus lanatus
Cla017202
I
0.674
27757.m000022
Ricinus communis
27757.m000022
I
0.674
PRUPE_ppa025397mg
Prunus persica
PRUPE_ppa025397mg
I
0.674
cassava33845.m1
Manihot esculenta
cassava33845.m1
I
0.674
cassava41268.m1
Manihot esculenta
cassava41268.m1
I
0.674
OB11G10130
Oryza brachyantha
OB11G10130
I
0.674
LPERR11G00400
Leersia perrieri
LPERR11G00400
I
0.674
evm.TU.supercontig_19.148
Carica papaya
evm.TU.supercontig_19.148
I
0.674
ORGLA02G0236600
Oryza glaberrima
ORGLA02G0236600
I
0.673
OB02G34860
Oryza brachyantha
OB02G34860
I
0.673
OPUNC02G25130
Oryza punctata
OPUNC02G25130
I
0.673
OMERI02G26760
Oryza meridionalis
OMERI02G26760
I
0.673
OLONG_000346
Oryza longistaminata
OLONG_000346
I
0.673
BGIOSGA008790
Oryza indica
BGIOSGA008790
I
0.673
ORUFI02G28930
Oryza rufipogon
ORUFI02G28930
I
0.673
OGLUM02G28020
Oryza glumaepatula
OGLUM02G28020
I
0.673
ONIVA02G30300
Oryza nivara
ONIVA02G30300
I
0.673
OBART02G27470
Oryza barthii
OBART02G27470
I
0.673
POPTR_0021s00430
Populus trichocarpa
POPTR_0021s00430
I
0.672
Sb08g000510
Sorghum bicolor
Sb08g000510
I
0.668
orange1.1g043383m.g
Citrus sinensis
orange1.1g043383m.g
I
0.668
POPTR_0016s12940
Populus trichocarpa
POPTR_0016s12940
I
0.668
MDP0000617021
Malus domestica
MDP0000617021
I
0.668
Si010342m.g
Setaria italica
Si010342m.g
I
0.668
Si026524m.g
Setaria italica
Si026524m.g
I
0.668
BRADI4G44930
Brachypodium distachyon
BRADI4G44930
I
0.668
Sb05g000480
Sorghum bicolor
Sb05g000480
I
0.668
BRADI4G26800
Brachypodium distachyon
BRADI4G26800
I
0.668
Pavir.J01622
Panicum virgatum
Pavir.J01622
I
0.668
Pavir.J16957
Panicum virgatum
Pavir.J16957
I
0.668
GRMZM5G846506
Zea mays
GRMZM5G846506
I
0.668
Bo7g113230
Brassica oleracea
Bo7g113230
I
0.667
gene19641-v1.0-hybrid
Fragaria vesca
gene19641-v1.0-hybrid
I
0.667
PRUPE_ppa014847mg
Prunus persica
PRUPE_ppa014847mg
I
0.666
MLOC_67081
Hordeum vulgare
MLOC_67081
N
0.665
VIT_06s0004g07000
Vitis vinifera
VIT_06s0004g07000
I
0.664
POPTR_0002s05770
Populus trichocarpa
POPTR_0002s05770
I
0.661