CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G62510
(
Brachypodium distachyon
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
BRADI2G62510
T268264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.787
0.839
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.686
0.710
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.686
0.710
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.673
0.613
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.673
0.613
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.664
0.624
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.664
0.624
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G62510.1
Myb
37
84
KGPWTEQEDMKLVWFVRLFGERRWDFLAKVSGLNRSGKSCRLRWVNYL
BRADI2G62510.1
Myb
90
135
RGRMSPDEERLVVELHAKWGNRWSRIARSMPGRTDNEIKNYWRTHT
Links
Other
Myb/SANT
family TFs
Other
Brachypodium distachyon
TFs
341 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy