BRADI3G49970 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI3G49970 T268306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.698 0.688
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.698 0.688
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.698 0.688
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.684 0.688
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.684 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G49970.1 Myb 15 62
BRADI3G49970.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

566 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_01825 Arthroderma benhamiae ARB_01825 N 0.000
BDDG_03774 Blastomyces dermatitidis BDDG_03774 N 0.000
CIMG_03132 Coccidioides immitis CIMG_03132 N 0.000
H101_02224 Trichophyton interdigitale H101_02224 N 0.000
H102_01362 Trichophyton rubrum H102_01362 N 0.000
H105_01382 Trichophyton soudanense H105_01382 N 0.000
HCBG_01431 Histoplasma capsulatum HCBG_01431 N 0.000
MCYG_06568 Microsporum canis MCYG_06568 N 0.000
MCYG_06568 Arthroderma otae MCYG_06568 N 0.000
MGYG_07064 Microsporum gypseum MGYG_07064 N 0.000
PAAG_05413 Paracoccidioides sp lutzii PAAG_05413 N 0.000
PABG_05965 Paracoccidioides brasiliensis PABG_05965 N 0.000
TEQG_04928 Trichophyton equinum TEQG_04928 N 0.000
TESG_04814 Trichophyton tonsurans TESG_04814 N 0.000
TRV_06420 Trichophyton verrucosum TRV_06420 N 0.000