BRADI4G06317 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI4G06317 T268325_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC

GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.771 0.849
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH

DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.771 0.849
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN

NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.771 0.849
MYB46
M00877_2.00
Arabidopsis thaliana
NAMCNDHHN

NDDHNGKTN
PBM
Franco-Zorrilla et al.(2014)
MYB46
0.761 0.860
MYB46
M11046_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB46_Q6
0.761 0.860
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G06317.1 Myb 32 79
BRADI4G06317.1 Myb 85 130

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MLOC_66577 Hordeum vulgare MLOC_66577 I 0.903
Traes_5BS_2CB91C54A Triticum aestivum Traes_5BS_2CB91C54A I 0.903
Traes_5DS_AACA2EBA3 Triticum aestivum Traes_5DS_AACA2EBA3 I 0.903
F775_06561 Aegilops tauschii F775_06561 I 0.903
TRIUR3_33254 Triticum urartu TRIUR3_33254 I 0.903
GRMZM2G052606 Zea mays GRMZM2G052606 I 0.894
Sb08g016620 Sorghum bicolor Sb08g016620 I 0.894
OMERI12G09660 Oryza meridionalis OMERI12G09660 I 0.879
OGLUM12G15400 Oryza glumaepatula OGLUM12G15400 I 0.879
OBART12G13720 Oryza barthii OBART12G13720 I 0.879
ONIVA05G29400 Oryza nivara ONIVA05G29400 I 0.879
OPUNC12G12380 Oryza punctata OPUNC12G12380 I 0.879
ORUFI12G15040 Oryza rufipogon ORUFI12G15040 I 0.879
ORGLA12G0120900 Oryza glaberrima ORGLA12G0120900 I 0.879
BGIOSGA036092 Oryza indica BGIOSGA036092 I 0.879
Si024786m.g Setaria italica Si024786m.g I 0.879
Pavir.Ca02370 Panicum virgatum Pavir.Ca02370 I 0.870
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.815
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I 0.812
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.803
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I 0.802
PK14287.1 Cannabis sativa PK14287.1 I 0.798
Bo3g061630 Brassica oleracea Bo3g061630 I 0.790
mgf024753m Mimulus guttatus mgf024753m I 0.788
TCM_005885 Theobroma cacao TCM_005885 I 0.786
Gorai.004G037300 Gossypium raimondii Gorai.004G037300 I 0.785
AMTR_s00022p00252530 Amborella trichopoda AMTR_s00022p00252530 I 0.785
OB12G21380 Oryza brachyantha OB12G21380 I 0.785
GSMUA_Achr8G31350_001 Musa acuminata GSMUA_Achr8G31350_001 I 0.782
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I 0.780
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I 0.780
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I 0.779
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.777
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I 0.777
GLYMA13G07020 Glycine max GLYMA13G07020 I 0.776
Bo3g008870 Brassica oleracea Bo3g008870 I 0.776
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I 0.776
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I 0.776
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I 0.776
Bra006166 Brassica rapa Bra006166 I 0.776
Bra001284 Brassica rapa Bra001284 I 0.774
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.772
cassava32908.m1 Manihot esculenta cassava32908.m1 I 0.772
PGSC0003DMG400006868 Solanum tuberosum PGSC0003DMG400006868 I 0.772
MYB83 Arabidopsis thaliana AT3G08500 D 0.771
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I 0.771
Bra029696 Brassica rapa Bra029696 I 0.771
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I 0.771
Carubv10014093m.g Capsella rubella Carubv10014093m.g I 0.771
Bo5g139830 Brassica oleracea Bo5g139830 I 0.771
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I 0.771
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I 0.767
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I 0.767
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I 0.767
Cagra.1535s0018 Capsella grandiflora Cagra.1535s0018 I 0.761
Bostr.2902s0023 Boechera stricta Bostr.2902s0023 I 0.761
Bra008875 Brassica rapa Bra008875 I 0.761
Bo9g169270 Brassica oleracea Bo9g169270 I 0.761
Carubv10001573m.g Capsella rubella Carubv10001573m.g I 0.761
MYB46 Arabidopsis thaliana AT5G12870 D 0.761
ATMYB46 Arabidopsis lyrata scaffold_601291.1 I 0.761
cassava39861.m1 Manihot esculenta cassava39861.m1 I 0.759
MYB83 Vitis vinifera VIT_13s0064g00960 I 0.757
MTR_3g028740 Medicago truncatula MTR_3g028740 I 0.757
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I 0.755
GSMUA_Achr2G07780_001 Musa acuminata GSMUA_Achr2G07780_001 I 0.755
Lus10027369.g Linum usitatissimum Lus10027369.g I 0.755
PRUPE_ppa016923mg Prunus persica PRUPE_ppa016923mg I 0.754
Pm016295 Prunus mume Pm016295 I 0.754
PDK_20s1844641g001 Phoenix dactylifera PDK_20s1844641g001 I 0.752
Bo2g010970 Brassica oleracea Bo2g010970 I 0.751
Solyc11g065840.1 Solanum lycopersicum Solyc11g065840.1 I 0.751
Thhalv10015560m.g Eutrema salsugineum Thhalv10015560m.g I 0.751
GLYMA19G05080 Glycine max GLYMA19G05080 I 0.751
MDP0000736994 Malus domestica MDP0000736994 I 0.751
PGSC0003DMG400007360 Solanum tuberosum PGSC0003DMG400007360 I 0.751
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.749
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.747
MDP0000722954 Malus domestica MDP0000722954 I 0.747
MDP0000204495 Malus domestica MDP0000204495 I 0.747
Cla008683 Citrullus lanatus Cla008683 I 0.747
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.747
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.747
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.747
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.747
Cucsa.065530 Cucumis sativus Cucsa.065530 I 0.747
Aquca_014_00829 Aquilegia coerulea Aquca_014_00829 I 0.747
MTR_2g097910 Medicago truncatula MTR_2g097910 I 0.747
Cla017541 Citrullus lanatus Cla017541 I 0.745
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.745
gene14666-v1.0-hybrid Fragaria vesca gene14666-v1.0-hybrid I 0.744
Lus10002559.g Linum usitatissimum Lus10002559.g I 0.742
Gorai.006G129100 Gossypium raimondii Gorai.006G129100 I 0.738
gene27001-v1.0-hybrid Fragaria vesca gene27001-v1.0-hybrid I 0.738
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.738
PK13930.1 Cannabis sativa PK13930.1 I 0.737
TCM_040694 Theobroma cacao TCM_040694 I 0.732
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.731
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.730
Lus10029520.g Linum usitatissimum Lus10029520.g I 0.729
Lus10039610.g Linum usitatissimum Lus10039610.g I 0.729
GLYMA15G03920 Glycine max GLYMA15G03920 I 0.726
GLYMA13G41470 Glycine max GLYMA13G41470 I 0.726
Cucsa.127860 Cucumis sativus Cucsa.127860 I 0.723
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.722
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.722
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.722
Cagra.10702s0006 Capsella grandiflora Cagra.10702s0006 I 0.720
Carubv10020714m.g Capsella rubella Carubv10020714m.g I 0.720
Lus10031850.g Linum usitatissimum Lus10031850.g I 0.715
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I 0.708
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I 0.708
LjSGA_026563.1 Lotus japonicus LjSGA_026563.1 I 0.706
Pm012272 Prunus mume Pm012272 I 0.697
GRMZM2G119693 Zea mays GRMZM2G119693 I 0.696
cassava24925.valid.m1 Manihot esculenta cassava24925.valid.m1 I 0.696
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.690
mgf019381m Mimulus guttatus mgf019381m I 0.687
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.686
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.684
orange1.1g021486m.g Citrus sinensis orange1.1g021486m.g I 0.681
Ciclev10021268m.g Citrus clementina Ciclev10021268m.g I 0.681
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.680
Bo9g010860 Brassica oleracea Bo9g010860 I 0.677
F775_01821 Aegilops tauschii F775_01821 I 0.677
TRIUR3_27020 Triticum urartu TRIUR3_27020 I 0.677
Bo2g156300 Brassica oleracea Bo2g156300 I 0.677
Bo7g095130 Brassica oleracea Bo7g095130 I 0.677
Ca_07460 Cicer arietinum Ca_07460 I 0.677
TRAES3BF071400020CFD_g Triticum aestivum TRAES3BF071400020CFD_g I 0.677
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.677
MYB86 Arabidopsis thaliana AT5G26660 I 0.677
MLOC_6156 Hordeum vulgare MLOC_6156 I 0.677
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.677
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.677
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.677
Bra036588 Brassica rapa Bra036588 I 0.677
OB07G24240 Oryza brachyantha OB07G24240 I 0.677
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.677
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.676
Bra003443 Brassica rapa Bra003443 I 0.675
GLYMA15G41810 Glycine max GLYMA15G41810 I 0.675
Bra014446 Brassica rapa Bra014446 I 0.675
BRADI2G17982 Brachypodium distachyon BRADI2G17982 I 0.674
Si022730m.g Setaria italica Si022730m.g I 0.674
GRMZM2G175232 Zea mays GRMZM2G175232 I 0.674
OB05G32030 Oryza brachyantha OB05G32030 I 0.674
BRADI2G40620 Brachypodium distachyon BRADI2G40620 I 0.673
GRMZM2G064744 Zea mays GRMZM2G064744 I 0.673
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.672
evm.TU.supercontig_6.280 Carica papaya evm.TU.supercontig_6.280 I 0.672
Pavir.J19191 Panicum virgatum Pavir.J19191 I 0.671
Pavir.Ca01788 Panicum virgatum Pavir.Ca01788 I 0.671
Sb09g027200 Sorghum bicolor Sb09g027200 I 0.671
Sb03g024500 Sorghum bicolor Sb03g024500 I 0.670
Pavir.J18139 Panicum virgatum Pavir.J18139 I 0.670
Pavir.J20716 Panicum virgatum Pavir.J20716 I 0.670
Bo8g095790 Brassica oleracea Bo8g095790 I 0.667
cassava44907.m1 Manihot esculenta cassava44907.m1 I 0.667
Bo5g009920 Brassica oleracea Bo5g009920 I 0.667
Bra007588 Brassica rapa Bra007588 I 0.667
OS05G0543600 Oryza sativa OS05G0543600 I 0.665
BGIOSGA020297 Oryza indica BGIOSGA020297 I 0.665
ORGLA05G0210500 Oryza glaberrima ORGLA05G0210500 I 0.665
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.665
OMERI05G21780 Oryza meridionalis OMERI05G21780 I 0.665
Traes_1AL_C7FD90C13 Triticum aestivum Traes_1AL_C7FD90C13 I 0.664
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I 0.664
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.664
F775_28951 Aegilops tauschii F775_28951 I 0.664
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.664
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.664
Traes_1AL_343F2D219 Triticum aestivum Traes_1AL_343F2D219 I 0.664
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.664
TRIUR3_16876 Triticum urartu TRIUR3_16876 I 0.664
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.663
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I 0.663
AtMYB50 Arabidopsis thaliana AT1G57560 I 0.663
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I 0.663
POPTR_0012s08600 Populus trichocarpa POPTR_0012s08600 I 0.663
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.662
Eucgr.B00229 Eucalyptus grandis Eucgr.B00229 I 0.662
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.661
OPUNC01G19230 Oryza punctata OPUNC01G19230 I 0.661
TRIUR3_16874 Triticum urartu TRIUR3_16874 I 0.661
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.661