BRADI5G16707 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI5G16707 T268360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW

WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.706 0.731
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.684 0.742
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.684 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G16707.1 Myb 14 61
BRADI5G16707.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29983.m003281 Ricinus communis 29983.m003281 I 0.695
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.663
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.706
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.702
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.695
BGIOSGA008700 Oryza indica BGIOSGA008700 I 0.749
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.821
Bo1g051220 Brassica oleracea Bo1g051220 I 0.723
Bo2g009800 Brassica oleracea Bo2g009800 I 0.675
Bo3g022210 Brassica oleracea Bo3g022210 I 0.673
Bo6g077600 Brassica oleracea Bo6g077600 I 0.691
Bo7g111870 Brassica oleracea Bo7g111870 I 0.706
Bo9g172290 Brassica oleracea Bo9g172290 I 0.668
Bostr.13175s0070 Boechera stricta Bostr.13175s0070 I 0.684
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.706
Bra024224 Brassica rapa Bra024224 I 0.706
Bra026281 Brassica rapa Bra026281 I 0.723
Bra028593 Brassica rapa Bra028593 I 0.675
Bra029033 Brassica rapa Bra029033 I 0.673
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.666
BRADI3G49987 Brachypodium distachyon BRADI3G49987 I 0.671
Cagra.1085s0031 Capsella grandiflora Cagra.1085s0031 I 0.684
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.706
Carubv10003148m.g Capsella rubella Carubv10003148m.g I 0.684
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.706
cassava17115.m1 Manihot esculenta cassava17115.m1 I 0.661
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.695
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.695
Ca_11228 Cicer arietinum Ca_11228 I 0.669
Ca_14119 Cicer arietinum Ca_14119 I 0.750
Ca_17627 Cicer arietinum Ca_17627 I 0.665
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.750
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.695
Cla007838 Citrullus lanatus Cla007838 I 0.725
Cla019747 Citrullus lanatus Cla019747 I 0.676
Cucsa.022180 Cucumis sativus Cucsa.022180 I 0.668
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.676
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.725
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.725
evm.TU.supercontig_34.69 Carica papaya evm.TU.supercontig_34.69 I 0.673
F775_14942 Aegilops tauschii F775_14942 I 0.666
F775_27854 Aegilops tauschii F775_27854 I 0.683
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.697
GLYMA06G45460 Glycine max GLYMA06G45460 I 0.695
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.691
GLYMA12G32610 Glycine max GLYMA12G32610 I 0.753
GLYMA13G37820 Glycine max GLYMA13G37820 I 0.732
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.700
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.684
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I 0.681
Gorai.013G113000 Gossypium raimondii Gorai.013G113000 I 0.668
GRMZM2G024468 Zea mays GRMZM2G024468 I 0.677
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.719
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.719
GRMZM2G123202 Zea mays GRMZM2G123202 N 0.753
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.664
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.704
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.707
GSMUA_Achr3G06470_001 Musa acuminata GSMUA_Achr3G06470_001 I 0.683
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.674
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.696
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.661
Lus10018418.g Linum usitatissimum Lus10018418.g I 0.663
MDP0000468201 Malus domestica MDP0000468201 I 0.678
MDP0000710259 Malus domestica MDP0000710259 I 0.678
mgf023669m Mimulus guttatus mgf023669m I 0.704
mgf025298m Mimulus guttatus mgf025298m I 0.704
mgf026502m Mimulus guttatus mgf026502m I 0.704
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.703
MLOC_52134 Hordeum vulgare MLOC_52134 I 0.672
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.876
MTR_2g089620 Medicago truncatula MTR_2g089620 I 0.732
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.661
MYB92 Arabidopsis lyrata fgenesh2_kg.6__990__AT5G10280.1 I 0.684
MYB92 Arabidopsis thaliana AT5G10280 D 0.684
OB02G32960 Oryza brachyantha OB02G32960 I 0.749
OB04G26860 Oryza brachyantha OB04G26860 I 0.821
OBART06G20450 Oryza barthii OBART06G20450 I 0.667
OGLUM06G21530 Oryza glumaepatula OGLUM06G21530 I 0.667
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.667
OMERI06G21070 Oryza meridionalis OMERI06G21070 I 0.667
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.821
ONIVA06G24230 Oryza nivara ONIVA06G24230 I 0.667
OPUNC06G18670 Oryza punctata OPUNC06G18670 I 0.667
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.695
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.821
ORGLA06G0168900 Oryza glaberrima ORGLA06G0168900 I 0.667
ORUFI02G27000 Oryza rufipogon ORUFI02G27000 I 0.749
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.821
ORUFI06G21880 Oryza rufipogon ORUFI06G21880 I 0.667
OS02G0641900 Oryza sativa OS02G0641900 I 0.749
Pavir.Aa01232 Panicum virgatum Pavir.Aa01232 I 0.766
Pavir.Ab02419 Panicum virgatum Pavir.Ab02419 I 0.766
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I 0.825
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I 0.825
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.666
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.673
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.725
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I 0.668
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.725
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.675
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.666
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.720
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I 0.704
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.687
SapurV1A.0417s0210 Salix purpurea SapurV1A.0417s0210 I 0.708
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.675
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.666
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.736
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.809
Si006790m.g Setaria italica Si006790m.g I 0.666
Si017934m.g Setaria italica Si017934m.g I 0.766
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I 0.668
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.725
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.673
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.725
TCM_007904 Theobroma cacao TCM_007904 I 0.695
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.723
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.859
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.876
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.876
Traes_4AL_9BF07972C Triticum aestivum Traes_4AL_9BF07972C I 0.666
Traes_4DL_4EE7DFCCD Triticum aestivum Traes_4DL_4EE7DFCCD I 0.666
Traes_6AL_2BA02CAA9 Triticum aestivum Traes_6AL_2BA02CAA9 I 0.672
Traes_6BL_0D6CD031E Triticum aestivum Traes_6BL_0D6CD031E I 0.672
Traes_6DL_41CBE9959 Triticum aestivum Traes_6DL_41CBE9959 I 0.683
Traes_6DL_8BF29D46C Triticum aestivum Traes_6DL_8BF29D46C I 0.672
TRIUR3_03772 Triticum urartu TRIUR3_03772 I 0.672
TRIUR3_17294 Triticum urartu TRIUR3_17294 I 0.666