CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYBL1
(
Callithrix jacchus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSCJAG00000004466
T269418_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mybl1
M00180_2.00
Mus musculus
HAACBGHHN
NDDCVGTTD
PBM
Badis et al.(2009)
Mybl1_1717
0.909
1.000
MYBL1
M03349_2.00
Homo sapiens
BVGTTKAACBGY
RCVGTTMAACBV
SELEX
Jolma et al.(2013)
MYBL1_1
0.909
1.000
MYBL1
M03350_2.00
Homo sapiens
RMVGTTAACGGT
ACCGTTAACBKY
SELEX
Jolma et al.(2013)
MYBL1_2
0.909
1.000
MYBL1
M03351_2.00
Homo sapiens
NHRACCGTTWN
NWAACGGTYDN
SELEX
Jolma et al.(2013)
MYBL1_3
0.909
1.000
MYBL1
M03352_2.00
Homo sapiens
HAACSGHHHHAACBGHC
GDCVGTTDDDDCSGTTD
SELEX
Jolma et al.(2013)
MYBL1_4
0.909
1.000
Mybl1
M09262_2.00
Mus musculus
BBNBYAACBGCCNSB
VSNGGCVGTTRVNVV
Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C
0.909
1.000
Myb
M00179_2.00
Mus musculus
HAACGGHHNN
NNDDCCGTTD
PBM
Badis et al.(2009)
Myb_1047
0.832
0.879
MYB
M08150_2.00
Homo sapiens
NNCAACTGHN
NDCAGTTGNN
ChIP-seq
Mathelier et al.(2014)
MA0100.3
0.832
0.879
MYB
M09260_2.00
Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A
0.832
0.879
Myb
M09261_2.00
Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A
0.832
0.879
Myb
M09601_2.00
Mus musculus
YAACBGYC
GRCVGTTR
Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095
0.832
0.879
MYB
M11050_2.00
Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG
Transfac
Matys et al.(2006)
V$CMYB_01
0.832
0.879
MYB
M11051_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYB_Q5
0.832
0.879
MYB
M11052_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q3
0.832
0.879
MYB
M11053_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q4
0.832
0.879
MYB
M11054_2.00
Homo sapiens
VNNAACKDBB
VVHMGTTNNB
Transfac
Matys et al.(2006)
V$MYB_Q6
0.832
0.879
MYB_AVIMB
M11068_2.00
Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB
Transfac
Matys et al.(2006)
V$VMYB_01
0.661
0.714
MYB_AVIMB
M11069_2.00
Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV
Transfac
Matys et al.(2006)
V$VMYB_02
0.661
0.714
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000008154
Myb
43
89
RVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVL
ENSCJAP00000008154
Myb
95
141
KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000008154
Myb
147
192
KSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTM
ENSCJAP00000008168
Myb
35
81
RVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVL
ENSCJAP00000008168
Myb
87
133
KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000008168
Myb
139
184
KSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTM
ENSCJAP00000008170
Myb
35
81
RVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVL
ENSCJAP00000008170
Myb
87
133
KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000008170
Myb
139
184
KSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Callithrix jacchus
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy