CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYB
(
Callithrix jacchus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSCJAG00000007798
T269421_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myb
M00179_2.00
Mus musculus
HAACGGHHNN
NNDDCCGTTD
PBM
Badis et al.(2009)
Myb_1047
0.903
0.993
MYB
M08150_2.00
Homo sapiens
NNCAACTGHN
NDCAGTTGNN
ChIP-seq
Mathelier et al.(2014)
MA0100.3
0.903
0.993
MYB
M09260_2.00
Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A
0.903
0.993
Myb
M09261_2.00
Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A
0.903
0.993
Myb
M09601_2.00
Mus musculus
YAACBGYC
GRCVGTTR
Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095
0.903
0.993
MYB
M11050_2.00
Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG
Transfac
Matys et al.(2006)
V$CMYB_01
0.903
0.993
MYB
M11051_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYB_Q5
0.903
0.993
MYB
M11052_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q3
0.903
0.993
MYB
M11053_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q4
0.903
0.993
MYB
M11054_2.00
Homo sapiens
VNNAACKDBB
VVHMGTTNNB
Transfac
Matys et al.(2006)
V$MYB_Q6
0.903
0.993
Mybl1
M00180_2.00
Mus musculus
HAACBGHHN
NDDCVGTTD
PBM
Badis et al.(2009)
Mybl1_1717
0.832
0.879
MYBL1
M03349_2.00
Homo sapiens
BVGTTKAACBGY
RCVGTTMAACBV
SELEX
Jolma et al.(2013)
MYBL1_1
0.832
0.879
MYBL1
M03350_2.00
Homo sapiens
RMVGTTAACGGT
ACCGTTAACBKY
SELEX
Jolma et al.(2013)
MYBL1_2
0.832
0.879
MYBL1
M03351_2.00
Homo sapiens
NHRACCGTTWN
NWAACGGTYDN
SELEX
Jolma et al.(2013)
MYBL1_3
0.832
0.879
MYBL1
M03352_2.00
Homo sapiens
HAACSGHHHHAACBGHC
GDCVGTTDDDDCSGTTD
SELEX
Jolma et al.(2013)
MYBL1_4
0.832
0.879
Mybl1
M09262_2.00
Mus musculus
BBNBYAACBGCCNSB
VSNGGCVGTTRVNVV
Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C
0.832
0.879
MYB_AVIMB
M11068_2.00
Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB
Transfac
Matys et al.(2006)
V$VMYB_01
0.689
0.750
MYB_AVIMB
M11069_2.00
Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV
Transfac
Matys et al.(2006)
V$VMYB_02
0.689
0.750
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000014867
Myb
33
79
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000014867
Myb
85
131
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000014867
Myb
137
182
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSCJAP00000014895
Myb
32
78
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000014895
Myb
84
130
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000014895
Myb
136
181
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSCJAP00000046330
Myb
33
79
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000046330
Myb
85
131
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000046330
Myb
137
182
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSCJAP00000047788
Myb
33
79
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000047788
Myb
85
131
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000047788
Myb
137
182
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSCJAP00000049460
Myb
33
79
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000049460
Myb
85
131
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000049460
Myb
137
182
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSCJAP00000049855
Myb
33
79
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000049855
Myb
85
131
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000049855
Myb
137
182
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSCJAP00000050583
Myb
33
79
KTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVL
ENSCJAP00000050583
Myb
85
131
KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL
ENSCJAP00000050583
Myb
137
182
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Callithrix jacchus
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy