ENSLACG00000002813 (Latimeria chalumnae)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ENSLACG00000002813 T269647_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Myb
M00179_2.00
Mus musculus
HAACGGHHNN

NNDDCCGTTD
PBM
Badis et al.(2009)
Myb_1047
0.895 0.971
MYB
M08150_2.00
Homo sapiens
NNCAACTGHN

NDCAGTTGNN
ChIP-seq
Mathelier et al.(2014)
MA0100.3
0.895 0.971
MYB
M09260_2.00
Homo sapiens
NYAACKGYYDNH

DNHRRCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A
0.895 0.971
Myb
M09261_2.00
Mus musculus
NYAACKGHHNBN

NVNDDCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A
0.895 0.971
Myb
M09601_2.00
Mus musculus
YAACBGYC

GRCVGTTR
Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095
0.895 0.971
MYB
M11050_2.00
Homo sapiens
CMVNCAACBGYCNBYNBV

BVNRVNGRCVGTTGNBKG
Transfac
Matys et al.(2006)
V$CMYB_01
0.895 0.971
MYB
M11051_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYB_Q5
0.895 0.971
MYB
M11052_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q3
0.895 0.971
MYB
M11053_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q4
0.895 0.971
MYB
M11054_2.00
Homo sapiens
VNNAACKDBB

VVHMGTTNNB
Transfac
Matys et al.(2006)
V$MYB_Q6
0.895 0.971
Mybl1
M00180_2.00
Mus musculus
HAACBGHHN

NDDCVGTTD
PBM
Badis et al.(2009)
Mybl1_1717
0.829 0.886
MYBL1
M03349_2.00
Homo sapiens
BVGTTKAACBGY

RCVGTTMAACBV
SELEX
Jolma et al.(2013)
MYBL1_1
0.829 0.886
MYBL1
M03350_2.00
Homo sapiens
RMVGTTAACGGT

ACCGTTAACBKY
SELEX
Jolma et al.(2013)
MYBL1_2
0.829 0.886
MYBL1
M03351_2.00
Homo sapiens
NHRACCGTTWN

NWAACGGTYDN
SELEX
Jolma et al.(2013)
MYBL1_3
0.829 0.886
MYBL1
M03352_2.00
Homo sapiens
HAACSGHHHHAACBGHC

GDCVGTTDDDDCSGTTD
SELEX
Jolma et al.(2013)
MYBL1_4
0.829 0.886
Mybl1
M09262_2.00
Mus musculus
BBNBYAACBGCCNSB

VSNGGCVGTTRVNVV
Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C
0.829 0.886
MYB_AVIMB
M11068_2.00
Avian myeloblastosis virus
VRYAACKGNH

DNCMGTTRYB
Transfac
Matys et al.(2006)
V$VMYB_01
0.689 0.750
MYB_AVIMB
M11069_2.00
Avian myeloblastosis virus
BVYAACGGH

DCCGTTRBV
Transfac
Matys et al.(2006)
V$VMYB_02
0.689 0.750
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000003141 Myb 40 86
ENSLACP00000003141 Myb 92 138
ENSLACP00000003141 Myb 144 189
ENSLACP00000023009 Myb 43 89
ENSLACP00000023009 Myb 95 141
ENSLACP00000023009 Myb 147 192

Links

Other Myb/SANT family TFs
Other Latimeria chalumnae TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
myb Xenopus tropicalis XB-GENE-867553 I 0.909
MYB Gallus gallus ENSGALG00000013956 I 0.909
XP_002935855 Xenopus tropicalis XP_002935855 I 0.909
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.906
MYB Anolis carolinensis ENSACAG00000009861 I 0.906
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.906
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.906
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.906
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.906
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.906
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.906
Tal_R007653 Tyto alba Tal_R007653 I 0.906
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.906
Aan_R009776 Calypte anna Aan_R009776 I 0.906
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.906
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.906
Gfo_R006432 Geospiza fortis Gfo_R006432 I 0.902
MYB Callithrix jacchus ENSCJAG00000007798 I 0.901
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.901
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.901
MYB Monodelphis domestica ENSMODG00000017488 I 0.901
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.895
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.895
Myb Mus musculus ENSMUSG00000019982 D 0.895
MYB Myotis lucifugus ENSMLUG00000002125 I 0.895
MYB Microcebus murinus ENSMICG00000005531 I 0.895
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.895
MYB Loxodonta africana ENSLAFG00000018350 I 0.895
MYB Procavia capensis ENSPCAG00000009197 I 0.895
MYB Sus scrofa ENSSSCG00000004167 I 0.895
MYB Sorex araneus ENSSARG00000002855 I 0.895
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.895
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.895
MYB Tursiops truncatus ENSTTRG00000003718 I 0.895
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.895
MYB Pan troglodytes ENSPTRG00000018631 I 0.895
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.895
MYB Otolemur garnettii ENSOGAG00000000056 I 0.895
MYB Ochotona princeps ENSOPRG00000013639 I 0.895
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.895
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.895
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.895
MYB Macaca mulatta ENSMMUG00000018166 I 0.895
MYB Homo sapiens ENSG00000118513 D 0.895
MYB Bos taurus ENSBTAG00000012074 I 0.895
MYB Canis familiaris ENSCAFG00000000230 I 0.895
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.895
MYB Cavia porcellus ENSCPOG00000014607 I 0.895
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.895
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.895
MYB Felis catus ENSFCAG00000001812 I 0.895
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.895
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.895
MYB Equus caballus ENSECAG00000009918 I 0.895
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I 0.891
MYB Tupaia belangeri ENSTBEG00000016454 I 0.879
Myb Rattus norvegicus ENSRNOG00000055858 I 0.877
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.869
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I 0.863
Ogr08782 Ophisaurus gracilis Ogr08782 I 0.862
myb.S Xenopus laevis XB-GENE-867566 I 0.861
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I 0.853
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.839
MYBL1 Anolis carolinensis ENSACAG00000016577 I 0.835
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I 0.835
Pvit_15001 Pogona vitticeps Pvit_15001 I 0.835
myb Danio rerio ENSDARG00000053666 I 0.833
Ogr00471 Ophisaurus gracilis Ogr00471 I 0.833
Mybl1 Rattus norvegicus ENSRNOG00000021669 I 0.829
MYBL1 Myotis lucifugus ENSMLUG00000003166 I 0.829
MYBL1 Canis familiaris ENSCAFG00000007344 I 0.829
MYBL1 Pan troglodytes ENSPTRG00000020308 I 0.829
MYBL1 Cavia porcellus ENSCPOG00000007578 I 0.829
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I 0.829
MYBL1 Callithrix jacchus ENSCJAG00000004466 I 0.829
MYBL1 Sorex araneus ENSSARG00000006938 I 0.829
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I 0.829
MYBL1 Tursiops truncatus ENSTTRG00000017138 I 0.829
MYBL1 Vicugna pacos ENSVPAG00000004194 I 0.829
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I 0.829
MYBL1 Loxodonta africana ENSLAFG00000004821 I 0.829
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I 0.829
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I 0.829
MYBL1 Gorilla gorilla ENSGGOG00000003892 I 0.829
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I 0.829
MYBL1 Macaca mulatta ENSMMUG00000013974 I 0.829
ENSP00000385360 Macaca fascicularis ENSP00000385360 I 0.829
MYBL1 Otolemur garnettii ENSOGAG00000004344 I 0.829
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I 0.829
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I 0.829
MYBL1 Equus caballus ENSECAG00000015959 I 0.829
Mybl1 Mus musculus ENSMUSG00000025912 D 0.829
MYBL1 Felis catus ENSFCAG00000031398 I 0.829
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I 0.829
MYBL1 Homo sapiens ENSG00000185697 D 0.829
MYBL1 Monodelphis domestica ENSMODG00000007964 I 0.829
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I 0.829
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I 0.827
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I 0.826
Gfo_R002003 Geospiza fortis Gfo_R002003 I 0.826
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I 0.826
Aan_R014924 Calypte anna Aan_R014924 I 0.819
Afo_R010364 Aptenodytes forsteri Afo_R010364 I 0.819
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I 0.819
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I 0.819
MYBL1 Echinops telfairi ENSETEG00000009840 I 0.813
Tal_R003498 Tyto alba Tal_R003498 I 0.803
myb Takifugu rubripes ENSTRUG00000016069 I 0.803
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.803
mybl1 Danio rerio ENSDARG00000030999 I 0.791
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I 0.790
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I 0.790
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I 0.790
myb Oryzias latipes ENSORLG00000016573 I 0.790
mybl1 Oryzias latipes ENSORLG00000008488 I 0.786
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I 0.786
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I 0.786
Brh_R006445 Buceros rhinoceros Brh_R006445 I 0.783
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I 0.781
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I 0.776
mybl1 Takifugu rubripes ENSTRUG00000008816 I 0.775
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I 0.770
myb Gasterosteus aculeatus ENSGACG00000011054 I 0.767
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I 0.761
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I 0.759
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I 0.756
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I 0.753
mybl1 Xenopus tropicalis XB-GENE-986560 I 0.746
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I 0.744
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I 0.744
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I 0.739
MYB Gorilla gorilla ENSGGOG00000001379 I 0.734
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I 0.732
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.730
ENSMEUG00000010838 Macropus eugenii ENSMEUG00000010838 I 0.725
MYBL1 Procavia capensis ENSPCAG00000009301 I 0.725
MYBL1 Microcebus murinus ENSMICG00000009881 I 0.722
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I 0.717
SMAR001262 Strigamia maritima SMAR001262 I 0.712
mybl1.L Xenopus laevis XB-GENE-986561 I 0.704
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.689
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D 0.689
ENSCING00000018880 Ciona intestinalis ENSCING00000018880 I 0.684
MYBL1 Bos taurus ENSBTAG00000011981 I 0.683
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I 0.683
Cflo_09641--XP_393231.3_APIME Camponotus floridanus Cflo_09641--XP_393231.3_APIME I 0.675
NEMVEDRAFT_v1g38726 Nematostella vectensis NEMVEDRAFT_v1g38726 I 0.669
GB44791 Apis mellifera GB44791 I 0.669
MYBL1 Ochotona princeps ENSOPRG00000005971 I 0.667
Cmyd_10015187 Chelonia mydas Cmyd_10015187 I 0.665
ENSPSIG00000016162 Pelodiscus sinensis ENSPSIG00000016162 I 0.664
Alligator_sinensis_CCG014289.1 Alligator sinensis Alligator_sinensis_CCG014289.1 I 0.664
XP_002166953.1 Hydra magnipapillata XP_002166953.1 I 0.663