CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Snapc4
(
Mus musculus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSMUSG00000036281
T269788_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA binding activity; RNA polymerase II general transcription initiation factor activity; and RNA polymerase III general transcription initiation factor activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Predicted to be located in nucleus. Predicted to be part of snRNA-activating protein complex. Is expressed in early conceptus and genitourinary system. Orthologous to human SNAPC4 (small nuclear RNA activating complex polypeptide 4). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000041767
Myb
252
287
ALLGNRLDSHDWEKISNINFEGARSAEEIRKFWQSS
ENSMUSP00000041767
Myb
294
341
KQEWSTEEVERLKAIAATHGHLEWHLVAEELGTSRSAFQCLQKFQQYN
ENSMUSP00000041767
Myb
346
395
RKEWTEEEDHMLTQLVQEMRVGNHIPYRKIVYFMEGRDSMQLIYRWTKSL
ENSMUSP00000041767
Myb
401
447
RGFWAPEEDAKLLQAVAKYGAQDWFKIREEVPGRSDAQCRDRYIRRL
ENSMUSP00000041767
Myb
453
498
KGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKWKIL
ENSMUSP00000109750
Myb
260
295
ALLGNRLDSHDWEKISNINFEGARSAEEIRKFWQSS
ENSMUSP00000109750
Myb
302
349
KQEWSTEEVERLKAIAATHGHLEWHLVAEELGTSRSAFQCLQKFQQYN
ENSMUSP00000109750
Myb
354
403
RKEWTEEEDHMLTQLVQEMRVGNHIPYRKIVYFMEGRDSMQLIYRWTKSL
ENSMUSP00000109750
Myb
409
455
RGFWAPEEDAKLLQAVAKYGAQDWFKIREEVPGRSDAQCRDRYIRRL
ENSMUSP00000109750
Myb
461
506
KGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKWKIL
ENSMUSP00000122456
Myb
48
97
RKEWTEEEDHMLTQLVQEMRVGNHIPYRKIVYFMEGRDSMQLIYRWTKSL
ENSMUSP00000122456
Myb
103
149
RGFWAPEEDAKLLQAVAKYGAQDWFKIREEVPGRSDAQCRDRYIRRL
ENSMUSP00000122456
Myb
155
200
KGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKWKIL
Links
Other
Myb/SANT
family TFs
Other
Mus musculus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy