Mybl2 (Rattus norvegicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ENSRNOG00000007805 T270011_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mybl2
M00807_2.00
Mus musculus
HAACSGHYN

NRDCSGTTD
PBM
Weirauch et al.(2013)
pTH3712
0.893 0.993
MYBL2
M03345_2.00
Homo sapiens
RDMSGTTAACSGTT

AACSGTTAACSKHY
SELEX
Jolma et al.(2013)
MYBL2_1
0.893 0.993
MYBL2
M03346_2.00
Homo sapiens
RCCGTTAVRACCGTTA

TAACGGTYBTAACGGY
SELEX
Jolma et al.(2013)
MYBL2_2
0.893 0.993
MYBL2
M03347_2.00
Homo sapiens
NNRACCGTTWN

NWAACGGTYNN
SELEX
Jolma et al.(2013)
MYBL2_3
0.893 0.993
MYBL2
M03348_2.00
Homo sapiens
RDCCGTTWAACBGHY

RDCVGTTWAACGGHY
SELEX
Jolma et al.(2013)
MYBL2_4
0.893 0.993
MYBL2
M05561_2.00
Homo sapiens
NWAACSGTYDN

NHRACSGTTWN
SELEX
Yin et al.(2017)
MYBL2_eDBD_HT-SELEX
0.893 0.993
MYBL2
M09600_2.00
Homo sapiens
NHAACNGHYN

NRDCNGTTDN
Misc
Heinz et al.(2010)
Hela-BMYB_GSE27030
0.893 0.993
MYBL2
M05562_2.00
Homo sapiens
NHRACSGTYDN

NHRACSGTYDN
SELEX
Yin et al.(2017)
MYBL2_eDBD_Methyl-HT-SELEX
0.893 0.993
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000010343 Myb 31 77
ENSRNOP00000010343 Myb 83 129
ENSRNOP00000010343 Myb 135 180

Links

Other Myb/SANT family TFs
Other Rattus norvegicus TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_05724 Aegilops tauschii F775_05724 I 0.000
BRADI2G07677 Brachypodium distachyon BRADI2G07677 N 0.000
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.000
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.000
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.000
OBART01G08110 Oryza barthii OBART01G08110 I 0.000
OB01G18340 Oryza brachyantha OB01G18340 I 0.000
OB12G16480 Oryza brachyantha OB12G16480 I 0.000
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.000
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.000
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.000
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.000
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.000
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.000
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.000
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.000
OS12G0238000 Oryza sativa OS12G0238000 I 0.000
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.000
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.000
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.000
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.000
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.000
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.000
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.000