Mypop (Rattus norvegicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ENSRNOG00000014132 T270012_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human MYPOP (Myb related transcription factor, partner of profilin). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mypop
M00808_2.00 		Mus musculus
NWTWGCGCHN
NDGCGCWAWN		 PBM
Weirauch et al.(2013)
pTH3456 		0.909 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000019069 Myb 21 88
ENSRNOP00000069289 Myb 20 87

Links

Other Myb/SANT family TFs
Other Rattus norvegicus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mypop Mus musculus ENSMUSG00000048481 D 0.909
MYPOP Oryctolagus cuniculus ENSOCUG00000029475 I 0.901
ENSOARG00000010393 Ovis aries ENSOARG00000010393 I 0.901
ENSNLEG00000002401 Nomascus leucogenys ENSNLEG00000002401 I 0.901
ENSPANG00000002240 Papio anubis ENSPANG00000002240 I 0.901
MYPOP Pan troglodytes ENSPTRG00000028972 I 0.901
ENSP00000325402-D1 Bos grunniens ENSP00000325402-D1 I 0.901
ENSSTOG00000001557 Ictidomys tridecemlineatus ENSSTOG00000001557 I 0.901
ENSSSCG00000003097 Sus scrofa ENSSSCG00000003097 I 0.901
MYPOP Procavia capensis ENSPCAG00000005499 I 0.901
ENSMPUG00000005494 Mustela putorius furo ENSMPUG00000005494 I 0.901
MYPOP Cavia porcellus ENSCPOG00000012168 I 0.901
ENSCSAG00000003108 Chlorocebus sabaeus ENSCSAG00000003108 I 0.901
MYPOP Callithrix jacchus ENSCJAG00000036087 I 0.901
MYPOP Canis familiaris ENSCAFG00000023848 I 0.901
MYPOP Bos taurus ENSBTAG00000045708 I 0.901
MYPOP Gorilla gorilla ENSGGOG00000017080 I 0.901
MYPOP Homo sapiens ENSG00000176182 I 0.901
ENSMMUG00000028745 Macaca mulatta ENSMMUG00000028745 I 0.901
FBXO46 Loxodonta africana ENSLAFG00000027244 I 0.901
ENSMICG00000001899 Microcebus murinus ENSMICG00000001899 I 0.879
ENSAMEG00000000662 Ailuropoda melanoleuca ENSAMEG00000000662 I 0.848
MYPOP Tursiops truncatus ENSTTRG00000014314 I 0.798
ENSSHAG00000002071 Sarcophilus harrisii ENSSHAG00000002071 I 0.764
MYPOP Monodelphis domestica ENSMODG00000021531 I 0.764
Pvit_16908 Pogona vitticeps Pvit_16908 I 0.749
ENSLACG00000014521 Latimeria chalumnae ENSLACG00000014521 I 0.664