CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Snapc4
(
Rattus norvegicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSRNOG00000018845
T270014_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA binding activity; RNA polymerase II general transcription initiation factor activity; and RNA polymerase III general transcription initiation factor activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Predicted to be part of snRNA-activating protein complex. Orthologous to human SNAPC4 (small nuclear RNA activating complex polypeptide 4). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000058393
Myb
252
287
ALLGNRLDSHDWEKISNVNFEGARSAEEIRKFWQSS
ENSRNOP00000058393
Myb
294
341
KKEWSTEEVERLKTIAASHGHLEWHLVAEELGTSRSAFQCLQKFQQYN
ENSRNOP00000058393
Myb
346
395
RKEWTEEEDHMLTQLVQEMRVGNHIPYRRIVYFMEGRDSMQLIYRWTKSL
ENSRNOP00000058393
Myb
401
447
RGFWAPEEDAKLLQAVAKYGAQDWFKIREEVPGRSDAQCRDRYIRRL
ENSRNOP00000058393
Myb
453
498
KGRWDAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKWKIL
ENSRNOP00000061702
Myb
252
287
ALLGNRLDSHDWEKISNVNFEGARSAEEIRKFWQSS
ENSRNOP00000061702
Myb
294
341
KKEWSTEEVERLKTIAASHGHLEWHLVAEELGTSRSAFQCLQKFQQYN
ENSRNOP00000061702
Myb
346
395
RKEWTEEEDHMLTQLVQEMRVGNHIPYRRIVYFMEGRDSMQLIYRWTKSL
ENSRNOP00000061702
Myb
401
447
RGFWAPEEDAKLLQAVAKYGAQDWFKIREEVPGRSDAQCRDRYIRRL
ENSRNOP00000061702
Myb
453
498
KGRWDAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKWKIL
Links
Other
Myb/SANT
family TFs
Other
Rattus norvegicus
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy