CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smarca5
(
Rattus norvegicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSRNOG00000021584
T270018_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000029841
Myb
665
708
GKNYTEEENRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDW
Links
Other
Myb/SANT
family TFs
Other
Rattus norvegicus
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG182249
Lottia gigantea
LotgiG182249
N
0.855
HMEL004008
Heliconius melpomene
HMEL004008
N
0.853
Sakowv30022101m.g
Saccoglossus kowalevskii
Sakowv30022101m.g
N
0.828
Ocbimv22035363m.g
Octopus bimaculoides
Ocbimv22035363m.g
N
0.825
CGI_10021531
Crassostrea gigas
CGI_10021531
N
0.816
YQE_02907
Dendroctonus ponderosae
YQE_02907
N
0.805
AMAM002480
Anopheles maculatus
AMAM002480
N
0.799
SPER_0002845401
Spirometra erinaceieuropaei
SPER_0002845401
N
0.789
LDEC005088
Leptinotarsa decemlineata
LDEC005088
N
0.783
SMAR014171
Strigamia maritima
SMAR014171
N
0.779
ENSTGUG00000015201
Taeniopygia guttata
ENSTGUG00000015201
N
0.778
SMARCA1
Pteropus vampyrus
ENSPVAG00000003805
N
0.775
ACUA008027
Anopheles culicifacies
ACUA008027
N
0.770
Brh_R002088
Buceros rhinoceros
Brh_R002088
N
0.766
EmuJ_001187700
Echinococcus multilocularis
EmuJ_001187700
N
0.764
TTAC_0000153401
Hydatigera taeniaeformis
TTAC_0000153401
N
0.763
AMIN008664
Anopheles minimus
AMIN008664
N
0.763
TsM_000501300
Taenia solium
TsM_000501300
N
0.763
scaffold164-EXSNAP2012.18
Pristionchus exspectatus
scaffold164-EXSNAP2012.18
N
0.759
SMRZ_0002157401
Schistosoma margrebowiei
SMRZ_0002157401
N
0.758
ENSVPAG00000010492
Vicugna pacos
ENSVPAG00000010492
N
0.757
ENSTSYG00000004240
Tarsius syrichta
ENSTSYG00000004240
N
0.757
ENSEEUG00000014927
Erinaceus europaeus
ENSEEUG00000014927
N
0.757
ENSGGOG00000012841
Gorilla gorilla
ENSGGOG00000012841
N
0.757
swi/snf
Ciona intestinalis
ENSCING00000004110
N
0.756
ENSCSAVG00000004620
Ciona savignyi
ENSCSAVG00000004620
N
0.755
SPER_0000373001
Spirometra erinaceieuropaei
SPER_0000373001
N
0.748
ECANG7_04410
Echinococcus canadensis
ECANG7_04410
N
0.745
HDID_0000819001
Hymenolepis diminuta
HDID_0000819001
N
0.744
HmN_000065900
Hymenolepis microstoma
HmN_000065900
N
0.744
DILT_0001089701
Diphyllobothrium latum
DILT_0001089701
N
0.742
ENSPMAG00000007461
Petromyzon marinus
ENSPMAG00000007461
N
0.740
T265_00769
Opisthorchis viverrini
T265_00769
N
0.738
Sjc_0053770
Schistosoma japonicum
Sjc_0053770
N
0.738
HNAJ_0000675501
Hymenolepis nana
HNAJ_0000675501
N
0.738
EFV57661
Trichinella spiralis
EFV57661
N
0.735
EFV57612
Trichinella spiralis
EFV57612
N
0.735
D915_01091
Fasciola hepatica
D915_01091
N
0.731
csin106540
Clonorchis sinensis
csin106540
N
0.731
SMU15038703
Schmidtea mediterranea
SMU15038703
N
0.730
estExt_fgenesh2_pm.C_2200002
Branchiostoma floridae
estExt_fgenesh2_pm.C_2200002
N
0.729
tetur03g08660
Tetranychus urticae
tetur03g08660
N
0.727
L798_15354
Zootermopsis nevadensis
L798_15354
N
0.723
SCUD_0000101601
Schistosoma curassoni
SCUD_0000101601
N
0.717
A_03823
Schistosoma haematobium
A_03823
N
0.717
Smp_008830
Schistosoma mansoni
Smp_008830
N
0.717
SPU_016575
Strongylocentrotus purpuratus
SPU_016575
N
0.715
ENSSHAG00000013518
Sarcophilus harrisii
ENSSHAG00000013518
N
0.715
HelroG101736
Helobdella robusta
HelroG101736
N
0.683