Myb (Rattus norvegicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ENSRNOG00000055858 T270026_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Myb
M00179_2.00
Mus musculus
HAACGGHHNN

NNDDCCGTTD
PBM
Badis et al.(2009)
Myb_1047
0.885 0.964
MYB
M08150_2.00
Homo sapiens
NNCAACTGHN

NDCAGTTGNN
ChIP-seq
Mathelier et al.(2014)
MA0100.3
0.885 0.964
MYB
M09260_2.00
Homo sapiens
NYAACKGYYDNH

DNHRRCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A
0.885 0.964
Myb
M09261_2.00
Mus musculus
NYAACKGHHNBN

NVNDDCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A
0.885 0.964
Myb
M09601_2.00
Mus musculus
YAACBGYC

GRCVGTTR
Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095
0.885 0.964
MYB
M11050_2.00
Homo sapiens
CMVNCAACBGYCNBYNBV

BVNRVNGRCVGTTGNBKG
Transfac
Matys et al.(2006)
V$CMYB_01
0.885 0.964
MYB
M11051_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYB_Q5
0.885 0.964
MYB
M11052_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q3
0.885 0.964
MYB
M11053_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q4
0.885 0.964
MYB
M11054_2.00
Homo sapiens
VNNAACKDBB

VVHMGTTNNB
Transfac
Matys et al.(2006)
V$MYB_Q6
0.885 0.964
Mybl1
M00180_2.00
Mus musculus
HAACBGHHN

NDDCVGTTD
PBM
Badis et al.(2009)
Mybl1_1717
0.820 0.857
MYBL1
M03349_2.00
Homo sapiens
BVGTTKAACBGY

RCVGTTMAACBV
SELEX
Jolma et al.(2013)
MYBL1_1
0.820 0.857
MYBL1
M03350_2.00
Homo sapiens
RMVGTTAACGGT

ACCGTTAACBKY
SELEX
Jolma et al.(2013)
MYBL1_2
0.820 0.857
MYBL1
M03351_2.00
Homo sapiens
NHRACCGTTWN

NWAACGGTYDN
SELEX
Jolma et al.(2013)
MYBL1_3
0.820 0.857
MYBL1
M03352_2.00
Homo sapiens
HAACSGHHHHAACBGHC

GDCVGTTDDDDCSGTTD
SELEX
Jolma et al.(2013)
MYBL1_4
0.820 0.857
Mybl1
M09262_2.00
Mus musculus
BBNBYAACBGCCNSB

VSNGGCVGTTRVNVV
Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C
0.820 0.857
MYB_AVIMB
M11068_2.00
Avian myeloblastosis virus
VRYAACKGNH

DNCMGTTRYB
Transfac
Matys et al.(2006)
V$VMYB_01
0.671 0.721
MYB_AVIMB
M11069_2.00
Avian myeloblastosis virus
BVYAACGGH

DCCGTTRBV
Transfac
Matys et al.(2006)
V$VMYB_02
0.671 0.721
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000069389 Myb 33 79
ENSRNOP00000069389 Myb 85 131
ENSRNOP00000069389 Myb 137 182
ENSRNOP00000072163 Myb 33 79
ENSRNOP00000072163 Myb 85 131
ENSRNOP00000072163 Myb 137 182

Links

Other Myb/SANT family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action