CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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myb
(
Takifugu rubripes
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSTRUG00000016069
T270123_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myb
M00179_2.00
Mus musculus
HAACGGHHNN
NNDDCCGTTD
PBM
Badis et al.(2009)
Myb_1047
0.796
0.929
MYB
M08150_2.00
Homo sapiens
NNCAACTGHN
NDCAGTTGNN
ChIP-seq
Mathelier et al.(2014)
MA0100.3
0.796
0.929
MYB
M09260_2.00
Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A
0.796
0.929
Myb
M09261_2.00
Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A
0.796
0.929
Myb
M09601_2.00
Mus musculus
YAACBGYC
GRCVGTTR
Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095
0.796
0.929
MYB
M11050_2.00
Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG
Transfac
Matys et al.(2006)
V$CMYB_01
0.796
0.929
MYB
M11051_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYB_Q5
0.796
0.929
MYB
M11052_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q3
0.796
0.929
MYB
M11053_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q4
0.796
0.929
MYB
M11054_2.00
Homo sapiens
VNNAACKDBB
VVHMGTTNNB
Transfac
Matys et al.(2006)
V$MYB_Q6
0.796
0.929
Mybl1
M00180_2.00
Mus musculus
HAACBGHHN
NDDCVGTTD
PBM
Badis et al.(2009)
Mybl1_1717
0.730
0.857
MYBL1
M03349_2.00
Homo sapiens
BVGTTKAACBGY
RCVGTTMAACBV
SELEX
Jolma et al.(2013)
MYBL1_1
0.730
0.857
MYBL1
M03350_2.00
Homo sapiens
RMVGTTAACGGT
ACCGTTAACBKY
SELEX
Jolma et al.(2013)
MYBL1_2
0.730
0.857
MYBL1
M03351_2.00
Homo sapiens
NHRACCGTTWN
NWAACGGTYDN
SELEX
Jolma et al.(2013)
MYBL1_3
0.730
0.857
MYBL1
M03352_2.00
Homo sapiens
HAACSGHHHHAACBGHC
GDCVGTTDDDDCSGTTD
SELEX
Jolma et al.(2013)
MYBL1_4
0.730
0.857
Mybl1
M09262_2.00
Mus musculus
BBNBYAACBGCCNSB
VSNGGCVGTTRVNVV
Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C
0.730
0.857
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000041088
Myb
57
103
KTRWTREEDEKLKKLVELHGSEDWKLIASLLPNRTDVQCQHRWQKVL
ENSTRUP00000041088
Myb
109
155
KGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHL
ENSTRUP00000041088
Myb
161
206
KTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSTRUP00000041089
Myb
46
92
KTRWTREEDEKLKKLVELHGSEDWKLIASLLPNRTDVQCQHRWQKVL
ENSTRUP00000041089
Myb
98
144
KGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHL
ENSTRUP00000041089
Myb
150
195
KTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSTRUP00000041090
Myb
40
86
KTRWTREEDEKLKKLVELHGSEDWKLIASLLPNRTDVQCQHRWQKVL
ENSTRUP00000041090
Myb
92
138
KGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHL
ENSTRUP00000041090
Myb
144
189
KTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTM
ENSTRUP00000041091
Myb
40
86
KTRWTREEDEKLKKLVELHGSEDWKLIASLLPNRTDVQCQHRWQKVL
ENSTRUP00000041091
Myb
92
138
KGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHL
ENSTRUP00000041091
Myb
144
189
KTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Takifugu rubripes
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy