fgenesh1_pg.C_scaffold_1001692 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.C_scaffold_1001692 T270667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_1001692 Myb 14 61
fgenesh1_pg.C_scaffold_1001692 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N 0.819
Carubv10010086m.g Capsella rubella Carubv10010086m.g N 0.800
Cagra.4153s0008 Capsella grandiflora Cagra.4153s0008 N 0.797
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N 0.762
Carubv10010045m.g Capsella rubella Carubv10010045m.g N 0.761
Bo5g025790 Brassica oleracea Bo5g025790 N 0.748
Bo8g091080 Brassica oleracea Bo8g091080 N 0.746
Bo8g068030 Brassica oleracea Bo8g068030 N 0.737
Bra025678 Brassica rapa Bra025678 N 0.732
Bo5g025730 Brassica oleracea Bo5g025730 N 0.732
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.718
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.706
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N 0.697
Carubv10011014m.g Capsella rubella Carubv10011014m.g N 0.694
Bo8g091100 Brassica oleracea Bo8g091100 N 0.684
Bra016546 Brassica rapa Bra016546 N 0.675
Bo6g118710 Brassica oleracea Bo6g118710 N 0.661
Bra015912 Brassica rapa Bra015912 N 0.661