AtMYB103 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pm.C_scaffold_8001268 T270718_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB80
M07142_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHNN
NNDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MS188_col_a 		0.905 0.978
MYB80
M07143_2.00 		Arabidopsis thaliana
YYYACCTAMYTWNNN
NNNWARKTAGGTRRR		 Dap-seq
OMalley et al.(2016)
MS188_colamp_a 		0.905 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_8001268 Myb 14 61
fgenesh1_pm.C_scaffold_8001268 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3745s0008 Capsella grandiflora Cagra.3745s0008 I 0.905
Carubv10027619m.g Capsella rubella Carubv10027619m.g I 0.905
Al_scaffold_0008_2049 Arabidopsis lyrata Al_scaffold_0008_2049 I 0.905
Thhalv10015622m.g Eutrema salsugineum Thhalv10015622m.g I 0.905
MYB80 Arabidopsis thaliana AT5G56110 D 0.905
Bra002847 Brassica rapa Bra002847 I 0.905
Bostr.26833s0652 Boechera stricta Bostr.26833s0652 I 0.896
Bo9g123440 Brassica oleracea Bo9g123440 I 0.894
Bra035604 Brassica rapa Bra035604 I 0.888
Bo2g036530 Brassica oleracea Bo2g036530 I 0.868
evm.TU.supercontig_12.83 Carica papaya evm.TU.supercontig_12.83 I 0.853
TCM_030529 Theobroma cacao TCM_030529 I 0.845
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.837
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.832
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.830
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.828
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.828
Ca_17657 Cicer arietinum Ca_17657 I 0.828
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.828
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.828
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.828
SapurV1A.0338s0180 Salix purpurea SapurV1A.0338s0180 I 0.828
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.828
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.827
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.827
SapurV1A.0395s0050 Salix purpurea SapurV1A.0395s0050 I 0.826
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.821
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.819
Cla004524 Citrullus lanatus Cla004524 I 0.817
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.814
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.813
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.810
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.810
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.810
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.810
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.810
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.810
Si012130m.g Setaria italica Si012130m.g I 0.810
OB04G23000 Oryza brachyantha OB04G23000 I 0.810
F775_22620 Aegilops tauschii F775_22620 I 0.810
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.810
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.810
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.810
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.810
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.810
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.810
POPTR_0001s47430 Populus trichocarpa POPTR_0001s47430 I 0.808
BGIOSGA030830 Oryza indica BGIOSGA030830 I 0.790
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.788
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I 0.765
Pavir.J28142 Panicum virgatum Pavir.J28142 I 0.694
Pavir.J07059 Panicum virgatum Pavir.J07059 I 0.691
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.688
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.688
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.684
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.684
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.683
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.680
MDP0000124992 Malus domestica MDP0000124992 I 0.680
MDP0000262514 Malus domestica MDP0000262514 I 0.680
MDP0000786507 Malus domestica MDP0000786507 I 0.680
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.679
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.673
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.673
OB03G42660 Oryza brachyantha OB03G42660 I 0.672
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.669
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.669
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.669
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.669
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.669
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.669
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.669
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.669
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.669
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.669
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.669
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.669
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.669
OBART03G35660 Oryza barthii OBART03G35660 I 0.669
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.669
OS03G0771100 Oryza sativa OS03G0771100 I 0.669
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.669
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.669
Si036681m.g Setaria italica Si036681m.g I 0.669
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.669
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.669
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.669
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.669
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.669
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.669
TCM_034634 Theobroma cacao TCM_034634 I 0.669
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.669
Cla014272 Citrullus lanatus Cla014272 I 0.669
Cla021213 Citrullus lanatus Cla021213 I 0.669
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.669
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.669
Ca_09203 Cicer arietinum Ca_09203 I 0.669
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.669
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.669
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.669
Ca_02249 Cicer arietinum Ca_02249 I 0.669
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.667
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.663
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.663
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I 0.661
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.661
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.661
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.661
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.661