TRFL3 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.1__1907__AT1G17460.1 T270727_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__1907__AT1G17460.1 Myb 503 553

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7128s0357 Boechera stricta Bostr.7128s0357 N 0.859
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N 0.825
Carubv10012426m.g Capsella rubella Carubv10012426m.g N 0.825
TRFL3 Arabidopsis thaliana AT1G17460 N 0.806
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N 0.765
BRADI3G57300 Brachypodium distachyon BRADI3G57300 N 0.745
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N 0.728
Cucsa.360310 Cucumis sativus Cucsa.360310 N 0.728
AMTR_s00009p00103030 Amborella trichopoda AMTR_s00009p00103030 N 0.724
29638.m000522 Ricinus communis 29638.m000522 N 0.723
Carubv10019876m.g Capsella rubella Carubv10019876m.g N 0.710
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N 0.710
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N 0.710
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N 0.710
Bo5g023810 Brassica oleracea Bo5g023810 N 0.701
TRFL6 Arabidopsis thaliana AT1G72650 N 0.700
Bra025973 Brassica rapa Bra025973 N 0.693
Lus10037678.g Linum usitatissimum Lus10037678.g N 0.676
Lus10015664.g Linum usitatissimum Lus10015664.g N 0.676
Bra016044 Brassica rapa Bra016044 N 0.672
cassava25004.valid.m1 Manihot esculenta cassava25004.valid.m1 N 0.669
TRIUR3_15439 Triticum urartu TRIUR3_15439 N 0.666
F775_05862 Aegilops tauschii F775_05862 N 0.666
MLOC_56874 Hordeum vulgare MLOC_56874 N 0.666
Traes_3AL_B71F3F028 Triticum aestivum Traes_3AL_B71F3F028 N 0.666
TRAES3BF079700090CFD_g Triticum aestivum TRAES3BF079700090CFD_g N 0.666
Traes_3DL_A631E1F0C Triticum aestivum Traes_3DL_A631E1F0C N 0.666