ARR12 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.4__435__AT2G25180.1 T270791_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07924.1
M01278_2.00
Cannabis sativa
NGATHYNNN

NNNRDATCN
PBM
Lambert et al.(2019)
pTH11431
0.672 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__435__AT2G25180.1 Myb 196 246

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10022837m.g Capsella rubella Carubv10022837m.g I 0.909
Cagra.2381s0022 Capsella grandiflora Cagra.2381s0022 I 0.909
ARR12 Arabidopsis thaliana AT2G25180 I 0.909
Bostr.26326s0153 Boechera stricta Bostr.26326s0153 N 0.870
Bra032035 Brassica rapa Bra032035 I 0.820
Bo4g157430 Brassica oleracea Bo4g157430 I 0.820
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I 0.804
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.761
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.761
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.761
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I 0.748
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.737
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.688
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.688
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.688
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.688
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.687
Cucsa.350850 Cucumis sativus Cucsa.350850 I 0.686
VIT_17s0000g10110 Vitis vinifera VIT_17s0000g10110 N 0.685
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.684
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.684
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.684
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.684
Cla021325 Citrullus lanatus Cla021325 I 0.684
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.684
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.684
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.684
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.684
29848.m004559 Ricinus communis 29848.m004559 I 0.684
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.684
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.684
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.684
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.684
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.684
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.683
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.679
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.679
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.679
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.679
RR22 Oryza sativa OS06G0183100 I 0.675
Si006013m.g Setaria italica Si006013m.g I 0.675
TCM_036926 Theobroma cacao TCM_036926 I 0.675
RR23 Oryza sativa OS02G0796500 I 0.675
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.675
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.675
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.675
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.675
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.675
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.675
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.675
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.675
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.675
Si016546m.g Setaria italica Si016546m.g I 0.675
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.675
OBART06G05360 Oryza barthii OBART06G05360 I 0.675
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.675
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.675
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.675
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.675
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.675
RR22 Oryza indica BGIOSGA022430 I 0.675
F775_19079 Aegilops tauschii F775_19079 I 0.675
RR23 Oryza indica BGIOSGA005436 I 0.675
OB02G42700 Oryza brachyantha OB02G42700 I 0.675
OB06G14930 Oryza brachyantha OB06G14930 I 0.675
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.675
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.675
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.672
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.672
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.672
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.672
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.672
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.672
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.672
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.672
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.672
OB01G49660 Oryza brachyantha OB01G49660 I 0.672
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.672
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.672
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.672
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.672
F775_27736 Aegilops tauschii F775_27736 I 0.672
PK07924.1 Cannabis sativa PK07924.1 D 0.672
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.672
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.672
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.672
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.672
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.672
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.672
MDP0000320381 Malus domestica MDP0000320381 I 0.672
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.672
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.672
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.672
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.672
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.672
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.672
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.672
OBART01G40940 Oryza barthii OBART01G40940 I 0.672
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.672
TCM_037098 Theobroma cacao TCM_037098 I 0.672
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.672
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.672
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.672
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.672
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.672
TCM_010701 Theobroma cacao TCM_010701 I 0.672
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.672
RR26 Oryza sativa OS01G0904700 I 0.672
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.672
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.672
Si000815m.g Setaria italica Si000815m.g I 0.672
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.672
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.672
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.672
Pm006838 Prunus mume Pm006838 I 0.672
29737.m001227 Ricinus communis 29737.m001227 I 0.672
29929.m004752 Ricinus communis 29929.m004752 I 0.672
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.672
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.672
Cla023064 Citrullus lanatus Cla023064 I 0.672
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.672
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.672
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.672
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.671
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.671
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.670
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.664
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.664
OB02G15530 Oryza brachyantha OB02G15530 I 0.663
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I 0.663
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I 0.663
RR24 Oryza sativa OS02G0182100 I 0.663
ONIVA02G07230 Oryza nivara ONIVA02G07230 I 0.663
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I 0.663
OMERI02G07120 Oryza meridionalis OMERI02G07120 I 0.663
LPERR02G05460 Leersia perrieri LPERR02G05460 I 0.663
OLONG_007266 Oryza longistaminata OLONG_007266 I 0.663
OBART02G06200 Oryza barthii OBART02G06200 I 0.663
RR24 Oryza indica BGIOSGA007015 I 0.663