CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYB118
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh2_kg.5__560__AT3G27785.1
T270805_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB118
M07087_2.00
Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH
Dap-seq
OMalley et al.(2016)
MYB118_col_a
0.875
0.957
MYB118
M07088_2.00
Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH
Dap-seq
OMalley et al.(2016)
MYB118_colamp_a
0.875
0.957
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.5__560__AT3G27785.1
Myb
184
230
KGQWTPEEDKLLVQLVELHGTKKWSQIAKMLQGRVGKQCRERWHNHL
fgenesh2_kg.5__560__AT3G27785.1
Myb
236
281
KDVWTEEEDMILIKAHKEIGNRWAEIARNLPGRTENTIKNHWNATK
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy