AtMYB6 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.6__2929__AT4G09460.1 T270823_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.810 0.914
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.810 0.914
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.774 0.903
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.669 0.753
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.666 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2929__AT4G09460.1 Myb 14 61
fgenesh2_kg.6__2929__AT4G09460.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

458 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF175 Homo sapiens ENSG00000105497 D 0.000
ZNF175 Gorilla gorilla ENSGGOG00000007359 I 0.000
ZNF175 Macaca mulatta ENSMMUG00000012764 I 0.000
ENSNLEG00000005943 Nomascus leucogenys ENSNLEG00000005943 I 0.000
ENSPANG00000010373 Papio anubis ENSPANG00000010373 I 0.000
ENSPPYG00000010572 Pongo abelii ENSPPYG00000010572 I 0.000
ZNF175 Pan troglodytes ENSPTRG00000011389 I 0.000
ZNF175 Sus scrofa ENSSSCG00000003233 I 0.000
ENSP00000262259 Macaca fascicularis ENSP00000262259 I 0.000