APRR2 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.7__2503__AT4G18020.2 T270836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN

NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.909 1.000
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.688 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.7__2503__AT4G18020.2 Myb 296 346

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
APRR2 Arabidopsis thaliana AT4G18020 D 0.909
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.890
Pm014733 Prunus mume Pm014733 I 0.890
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.890
PK19826.1 Cannabis sativa PK19826.1 I 0.890
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.890
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.890
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.882
30054.m000786 Ricinus communis 30054.m000786 I 0.880
MDP0000237396 Malus domestica MDP0000237396 I 0.876
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.863
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.863
Bra013279 Brassica rapa Bra013279 I 0.863
Bo1g019180 Brassica oleracea Bo1g019180 I 0.863
Bo7g105690 Brassica oleracea Bo7g105690 I 0.863
Bra012623 Brassica rapa Bra012623 I 0.863
Bra013278 Brassica rapa Bra013278 I 0.863
Bra013277 Brassica rapa Bra013277 I 0.863
Cla008926 Citrullus lanatus Cla008926 I 0.857
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.857
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.844
TCM_015780 Theobroma cacao TCM_015780 I 0.842
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.838
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.838
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.834
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.830
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.830
MDP0000248863 Malus domestica MDP0000248863 I 0.827
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.824
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.818
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.812
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.808
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.808
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.801
Ca_02285 Cicer arietinum Ca_02285 I 0.801
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.801
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.800
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.795
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.794
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.793
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.793
Ca_12825 Cicer arietinum Ca_12825 I 0.793
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.793
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.788
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.784
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.783
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.783
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.783
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.775
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.775
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.767
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.767
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.762
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.752
Ca_24009 Cicer arietinum Ca_24009 I 0.734
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.734
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.728
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.728
Cla016403 Citrullus lanatus Cla016403 I 0.727
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.723
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.719
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.719
GLK2 Arabidopsis thaliana AT5G44190 I 0.719
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.719
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.719
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.719
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.719
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.715
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.714
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.688
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.688
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.688
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.688
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.688
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.688
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.688
Cla003791 Citrullus lanatus Cla003791 I 0.688
GPRI1 Arabidopsis thaliana AT2G20570 D 0.688
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.688
mgf012846m Mimulus guttatus mgf012846m I 0.686
mgf007181m Mimulus guttatus mgf007181m I 0.686
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.682
TCM_008193 Theobroma cacao TCM_008193 I 0.668
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.668
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.668
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.668
PK27491.1 Cannabis sativa PK27491.1 I 0.668
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.668
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.668
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.668
MDP0000526864 Malus domestica MDP0000526864 I 0.668
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.668
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.668
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.668
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.668
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.668
MDP0000225179 Malus domestica MDP0000225179 I 0.668
Pm014123 Prunus mume Pm014123 I 0.668
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.668
29983.m003131 Ricinus communis 29983.m003131 I 0.668
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.668
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.668