GLYMA02G42140 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA02G42140 T271267_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G11280
M01075_2.00
Arabidopsis thaliana
NNTTATCNNN

NNNGATAANN
PBM
Sullivan et al.(2014)
pTH7245
0.750 0.851
AT3G11280
M07074_2.00
Arabidopsis thaliana
DWDWDGATAAKRWW

WWYMTTATCHWHWH
Dap-seq
OMalley et al.(2016)
At3g11280_col_a
0.750 0.851
AT3G11280
M07075_2.00
Arabidopsis thaliana
NNWNNDGATAAGRWHDNN

NNHDWYCTTATCHNNWNN
Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a
0.750 0.851
AT2G38090
M07055_2.00
Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN

NVNRDWNWRGATAARNWTVDD
Dap-seq
OMalley et al.(2016)
At2g38090_col_a
0.749 0.840
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN

NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.714 0.787
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN

NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.714 0.787
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN

NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.709 0.819
AT5G05790
M07119_2.00
Arabidopsis thaliana
HWYMTTATCHWNWHH

DDWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g05790_col_a
0.693 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA02G42140.1 Myb 136 183
GLYMA02G42140.2 Myb 124 171
GLYMA02G42140.3 Myb 38 87
GLYMA02G42140.3 Myb 138 185

Links

Other Myb/SANT family TFs
Other Glycine max TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_5g081860 Medicago truncatula MTR_5g081860 I 0.877
Ca_12513 Cicer arietinum Ca_12513 I 0.870
GLYMA11G34930 Glycine max GLYMA11G34930 I 0.864
GLYMA18G03430 Glycine max GLYMA18G03430 I 0.864
GLYMA14G06750 Glycine max GLYMA14G06750 I 0.864
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I 0.807
Cla004397 Citrullus lanatus Cla004397 I 0.788
29610.m000410 Ricinus communis 29610.m000410 I 0.787
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.775
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I 0.765
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I 0.765
Lus10009884.g Linum usitatissimum Lus10009884.g I 0.760
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.758
TCM_042604 Theobroma cacao TCM_042604 I 0.758
Bo4g187390 Brassica oleracea Bo4g187390 I 0.756
Bra005139 Brassica rapa Bra005139 I 0.756
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I 0.756
Bo4g029810 Brassica oleracea Bo4g029810 I 0.756
Carubv10023736m.g Capsella rubella Carubv10023736m.g I 0.756
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I 0.756
Bra017138 Brassica rapa Bra017138 I 0.756
evm.TU.supercontig_19.216 Carica papaya evm.TU.supercontig_19.216 I 0.756
Lus10014837.g Linum usitatissimum Lus10014837.g I 0.755
Cucsa.164580 Cucumis sativus Cucsa.164580 I 0.752
AT3G11280 Arabidopsis thaliana AT3G11280 D 0.750
Bra034173 Brassica rapa Bra034173 I 0.750
AT2G38090 Arabidopsis thaliana AT2G38090 D 0.749
Bo3g032160 Brassica oleracea Bo3g032160 I 0.749
Bra000038 Brassica rapa Bra000038 I 0.749
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.746
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I 0.746
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.745
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.745
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.741
TCM_021750 Theobroma cacao TCM_021750 I 0.741
Bostr.19424s1061 Boechera stricta Bostr.19424s1061 I 0.739
MDP0000221993 Malus domestica MDP0000221993 I 0.739
Bo5g136680 Brassica oleracea Bo5g136680 I 0.739
Thhalv10021322m.g Eutrema salsugineum Thhalv10021322m.g I 0.739
Pm018878 Prunus mume Pm018878 I 0.738
PRUPE_ppa018139mg Prunus persica PRUPE_ppa018139mg I 0.738
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I 0.736
Pm002536 Prunus mume Pm002536 I 0.736
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I 0.736
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.735
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.735
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.735
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.735
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.735
PK15104.1 Cannabis sativa PK15104.1 I 0.734
Bo1g141120 Brassica oleracea Bo1g141120 I 0.733
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.732
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.731
Ca_19327 Cicer arietinum Ca_19327 I 0.731
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.731
POPTR_0009s04730 Populus trichocarpa POPTR_0009s04730 I 0.731
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.731
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.731
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.730
fgenesh2_kg.3__1170__AT3G11280.1 Arabidopsis lyrata fgenesh2_kg.3__1170__AT3G11280.1 I 0.729
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I 0.729
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I 0.729
Bra034853 Brassica rapa Bra034853 I 0.728
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I 0.726
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I 0.726
29681.m001296 Ricinus communis 29681.m001296 I 0.726
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I 0.726
28288.m000014 Ricinus communis 28288.m000014 I 0.726
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I 0.724
TCM_041672 Theobroma cacao TCM_041672 I 0.723
MDP0000142580 Malus domestica MDP0000142580 I 0.723
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I 0.723
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.723
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I 0.723
evm.TU.supercontig_19.217 Carica papaya evm.TU.supercontig_19.217 I 0.722
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.721
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I 0.719
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I 0.719
Carubv10014411m.g Capsella rubella Carubv10014411m.g I 0.718
Cagra.1655s0043 Capsella grandiflora Cagra.1655s0043 I 0.718
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.715
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.715
PK27213.1 Cannabis sativa PK27213.1 D 0.714
Bra009134 Brassica rapa Bra009134 I 0.713
Bo9g176900 Brassica oleracea Bo9g176900 I 0.713
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I 0.710
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.710
GLYMA02G39000 Glycine max GLYMA02G39000 I 0.710
GLYMA03G14440 Glycine max GLYMA03G14440 I 0.709
PK27693.1 Cannabis sativa PK27693.1 D 0.709
GLYMA01G27720 Glycine max GLYMA01G27720 I 0.709
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I 0.706
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I 0.706
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.704
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I 0.700
Aquca_009_00736 Aquilegia coerulea Aquca_009_00736 I 0.698
Cla013553 Citrullus lanatus Cla013553 I 0.695
scaffold_600551.1 Arabidopsis lyrata scaffold_600551.1 I 0.693
Bostr.13129s0394 Boechera stricta Bostr.13129s0394 I 0.693
AT5G05790 Arabidopsis thaliana AT5G05790 D 0.693
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.692
Solyc03g096350.2 Solanum lycopersicum Solyc03g096350.2 I 0.692
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.692
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I 0.691
Ca_15603 Cicer arietinum Ca_15603 I 0.689
Thhalv10014370m.g Eutrema salsugineum Thhalv10014370m.g I 0.689
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.689
cassava23290.valid.m1 Manihot esculenta cassava23290.valid.m1 I 0.687
MDP0000277813 Malus domestica MDP0000277813 I 0.686
Cucsa.139090 Cucumis sativus Cucsa.139090 I 0.685
Carubv10001695m.g Capsella rubella Carubv10001695m.g I 0.683
Cagra.5131s0007 Capsella grandiflora Cagra.5131s0007 I 0.683
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I 0.679
Ca_14247 Cicer arietinum Ca_14247 I 0.679
gene20912-v1.0-hybrid Fragaria vesca gene20912-v1.0-hybrid I 0.678
MTR_5g069710 Medicago truncatula MTR_5g069710 I 0.678
GLYMA11G22960 Glycine max GLYMA11G22960 I 0.674
Bo9g135730 Brassica oleracea Bo9g135730 I 0.673
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I 0.672
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I 0.672
Eucgr.G03029 Eucalyptus grandis Eucgr.G03029 I 0.671
Pm000529 Prunus mume Pm000529 I 0.670
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I 0.669
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.668
Solyc09g014250.2 Solanum lycopersicum Solyc09g014250.2 I 0.668
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.664
GSMUA_Achr8G02380_001 Musa acuminata GSMUA_Achr8G02380_001 I 0.661
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.661