GLYMA05G09690 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA05G09690 T271340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HHO6
M07024_2.00
Arabidopsis thaliana
GAATCTNNDAT

ATHNNAGATTC
Dap-seq
OMalley et al.(2016)
AT1G49560_col_a
0.718 0.971
HHO6
M07025_2.00
Arabidopsis thaliana
DGAATCTHNGATHCN

NGDATCNDAGATTCH
Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a
0.718 0.971
NIGT1
M02328_2.00
Oryza sativa
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH8646
0.682 0.912
PK19779.1
M02354_2.00
Cannabis sativa
NNKATNCNNN

NNNGNATMNN
PBM
Weirauch et al.(2014)
pTH9610
0.682 0.912
HHO3
M02289_2.00
Arabidopsis thaliana
NWGATWCBNN

NNVGWATCWN
PBM
Weirauch et al.(2014)
pTH7278
0.674 0.882
HHO3
M07016_2.00
Arabidopsis thaliana
NNDHNNAAKATTCY

RGAATMTTNNDHNN
Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a
0.674 0.882
HHO3
M07017_2.00
Arabidopsis thaliana
HNNAAKATTCY

RGAATMTTNND
Dap-seq
OMalley et al.(2016)
At1g25550_col
0.674 0.882
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G09690.1 Myb 1 39

Links

Other Myb/SANT family TFs
Other Glycine max TFs

Invalid Input OrderBy

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action