CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA11G34930
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA11G34930
T271546_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G38090
M07055_2.00
Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD
Dap-seq
OMalley et al.(2016)
At2g38090_col_a
0.757
0.882
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.821
0.787
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN
NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.718
0.817
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.821
0.787
AT3G11280
M01075_2.00
Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN
PBM
Sullivan et al.(2014)
pTH7245
0.710
0.817
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.821
0.787
AT3G11280
M07074_2.00
Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH
Dap-seq
OMalley et al.(2016)
At3g11280_col_a
0.710
0.817
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN
NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.815
0.851
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.805
0.809
AT3G11280
M07075_2.00
Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN
Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a
0.710
0.817
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.805
0.809
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN
NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.701
0.785
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN
NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.701
0.785
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.805
0.809
AT5G05790
M07119_2.00
Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g05790_col_a
0.674
0.806
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.803
0.830
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.803
0.830
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN
NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.797
0.809
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.794
0.809
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD
HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.786
0.809
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN
NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.784
0.787
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN
NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.784
0.787
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.779
0.766
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.779
0.766
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.748
0.787
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.677
0.766
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.677
0.766
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.677
0.766
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.664
0.660
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.664
0.660
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA11G34930.4
Myb
69
116
GVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYY
GLYMA11G34930.5
Myb
124
171
GVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYY
GLYMA11G34930.6
Myb
124
171
GVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYY
GLYMA11G34930.7
Myb
124
171
GVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYY
GLYMA11G34930.8
Myb
124
171
GVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYY
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
697 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy