GLYMA12G32530 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA12G32530 T271571_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.670 0.699
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.670 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G32530.2 Myb 14 61
GLYMA12G32530.2 Myb 67 112

Links

Other Myb/SANT family TFs
Other Glycine max TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.670
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.681
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.676
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.666
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.682
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.672
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.682
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.663
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.666
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.706
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.681
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.679
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.673
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.671
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.664
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.712
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.715
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.664
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.697
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.691
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.687
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.703
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.721
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.676
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.703
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.674
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.696
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.748
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.731
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.723
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.675
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.662
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.662
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.662
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.662
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.662
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.662
Ca_12130 Cicer arietinum Ca_12130 I 0.665
Cla006077 Citrullus lanatus Cla006077 I 0.696
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.697
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.687
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.667
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.684
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.704
Pm030488 Prunus mume Pm030488 I 0.662
Pm019588 Prunus mume Pm019588 I 0.684
Pm015547 Prunus mume Pm015547 I 0.662
Cla021845 Citrullus lanatus Cla021845 I 0.663
Cla019747 Citrullus lanatus Cla019747 I 0.674
TCM_030020 Theobroma cacao TCM_030020 I 0.733
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.693
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.709
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.679
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.693
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.667
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.676
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.681
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.663
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.666
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.691
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.688
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.676
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.688
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.665
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.670
PK29337.1 Cannabis sativa PK29337.1 I 0.681
PK20358.1 Cannabis sativa PK20358.1 I 0.696
PK08038.1 Cannabis sativa PK08038.1 I 0.692
PK03488.1 Cannabis sativa PK03488.1 I 0.676
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.681
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.676
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.679
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.676
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.688
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.671
MDP0000574942 Malus domestica MDP0000574942 I 0.671
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.683
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.683
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.735
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.679
Gorai.009G236900 Gossypium raimondii Gorai.009G236900 I 0.662
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.671
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.687
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.700
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.687
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.668
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.661
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.667
MDP0000289283 Malus domestica MDP0000289283 I 0.685
MDP0000155426 Malus domestica MDP0000155426 I 0.740
MDP0000145050 Malus domestica MDP0000145050 I 0.684
MDP0000131822 Malus domestica MDP0000131822 I 0.698
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.684
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.703
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.704
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.667
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.707
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.673
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.717
TCM_026197 Theobroma cacao TCM_026197 I 0.712
OB04G30570 Oryza brachyantha OB04G30570 I 0.670
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.678
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.682
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.666
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.679
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.735
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.812
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.696
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.690
GLYMA06G45570 Glycine max GLYMA06G45570 I 0.686
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.678
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.732
OB04G25860 Oryza brachyantha OB04G25860 I 0.677
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.685
MTR_1g043050 Medicago truncatula MTR_1g043050 I 0.664
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.662
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.664
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.665
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.723
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.712
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.687
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.799
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.697
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.676
Bra018267 Brassica rapa Bra018267 I 0.676
Bra003619 Brassica rapa Bra003619 I 0.681
Bo6g081140 Brassica oleracea Bo6g081140 I 0.681
Bo4g176030 Brassica oleracea Bo4g176030 I 0.676
Bo4g176020 Brassica oleracea Bo4g176020 I 0.676
Bo3g025100 Brassica oleracea Bo3g025100 I 0.674
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.680
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.670
MYB14 Arabidopsis thaliana AT2G31180 I 0.676
Bra021708 Brassica rapa Bra021708 I 0.676
Bra022831 Brassica rapa Bra022831 I 0.674
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.676
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.662
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.690
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.679
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.681
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.670
F775_18231 Aegilops tauschii F775_18231 I 0.662
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.673
BRADI5G15760 Brachypodium distachyon BRADI5G15760 I 0.661
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.702
TCM_020889 Theobroma cacao TCM_020889 I 0.685
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.684
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.682
POPTR_0019s03490 Populus trichocarpa POPTR_0019s03490 I 0.666
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.733
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.670
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.661
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.662
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.662
Cagra.1671s0249 Capsella grandiflora Cagra.1671s0249 I 0.667
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.690
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.666
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.675
TCM_007868 Theobroma cacao TCM_007868 I 0.680
TCM_007865 Theobroma cacao TCM_007865 I 0.724
TCM_004046 Theobroma cacao TCM_004046 I 0.687
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.662
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.669
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.690
Si017704m.g Setaria italica Si017704m.g I 0.663
Si010814m.g Setaria italica Si010814m.g I 0.677
Si010384m.g Setaria italica Si010384m.g I 0.677
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.673
OS10G0478300 Oryza sativa OS10G0478300 I 0.680
OS04G0594100 Oryza sativa OS04G0594100 I 0.670
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.680
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.702
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.670
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.670
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.702
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.670
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.670
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.670
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.670
OBART04G23680 Oryza barthii OBART04G23680 I 0.670
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.662
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.685
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.725
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.720
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.700
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.689
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.727
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.701
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.737
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.674
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.757
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.714
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.722
PK24260.1 Cannabis sativa PK24260.1 N 0.709
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.718
Ca_22597 Cicer arietinum Ca_22597 N 0.706
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.682
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.753
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.730
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.695
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.729
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.692
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.679
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.674
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.709
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.704
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.669
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.672
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.707
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.699
Pm009880 Prunus mume Pm009880 N 0.671
Pm015302 Prunus mume Pm015302 N 0.753
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.661
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.714
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.691
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.663
MDP0000407613 Malus domestica MDP0000407613 N 0.737
29933.m001454 Ricinus communis 29933.m001454 N 0.677
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.689