GLYMA12G32610 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA12G32610 T271573_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.765 0.839
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.715 0.871
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.715 0.849
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.715 0.849
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.715 0.828
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.715 0.828
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.664 0.731
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.664 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G32610.1 Myb 14 61
GLYMA12G32610.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Glycine max TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G37820 Glycine max GLYMA13G37820 I 0.854
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.844
Ca_14119 Cicer arietinum Ca_14119 I 0.820
MTR_2g089620 Medicago truncatula MTR_2g089620 I 0.812
TCM_007904 Theobroma cacao TCM_007904 I 0.802
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.790
Cla007838 Citrullus lanatus Cla007838 I 0.790
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.790
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.790
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.790
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.790
Bo1g051220 Brassica oleracea Bo1g051220 I 0.788
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.788
Bra026281 Brassica rapa Bra026281 I 0.788
SapurV1A.0417s0210 Salix purpurea SapurV1A.0417s0210 I 0.773
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.771
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.771
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.771
Bra024224 Brassica rapa Bra024224 I 0.771
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.771
Bo7g111870 Brassica oleracea Bo7g111870 I 0.771
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I 0.770
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.769
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I 0.769
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.768
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.767
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.765
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.763
29983.m003281 Ricinus communis 29983.m003281 I 0.760
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.760
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.760
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.760
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.760
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.760
mgf023669m Mimulus guttatus mgf023669m I 0.757
mgf025298m Mimulus guttatus mgf025298m I 0.757
mgf026502m Mimulus guttatus mgf026502m I 0.757
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.755
BRADI5G16707 Brachypodium distachyon BRADI5G16707 I 0.753
evm.TU.supercontig_34.69 Carica papaya evm.TU.supercontig_34.69 I 0.747
PRUPE_ppa016708mg Prunus persica PRUPE_ppa016708mg I 0.747
MDP0000710259 Malus domestica MDP0000710259 I 0.743
MDP0000468201 Malus domestica MDP0000468201 I 0.743
Cla019747 Citrullus lanatus Cla019747 I 0.741
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.741
GLYMA06G45460 Glycine max GLYMA06G45460 I 0.740
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.740
Lus10018418.g Linum usitatissimum Lus10018418.g I 0.736
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.736
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.734
OBART07G18450 Oryza barthii OBART07G18450 I 0.734
OS07G0558100 Oryza sativa OS07G0558100 I 0.734
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.734
OB07G24240 Oryza brachyantha OB07G24240 I 0.734
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.734
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.734
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.734
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.734
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.734
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.734
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.734
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.732
Lus10039743.g Linum usitatissimum Lus10039743.g I 0.725
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.723
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.723
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.723
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.723
MLOC_62436 Hordeum vulgare MLOC_62436 I 0.717
Pm015309 Prunus mume Pm015309 I 0.717
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.715
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I 0.715
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I 0.715
TCM_030009 Theobroma cacao TCM_030009 I 0.715
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.715
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.715
Cla001360 Citrullus lanatus Cla001360 I 0.715
Pm009892 Prunus mume Pm009892 I 0.715
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I 0.715
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.715
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I 0.715
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.715
MDP0000492221 Malus domestica MDP0000492221 I 0.715
MYB49 Arabidopsis thaliana AT5G54230 D 0.715
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.715
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.715
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.715
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.715
Carubv10026801m.g Capsella rubella Carubv10026801m.g I 0.715
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.715
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.715
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.715
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I 0.715
mgf018114m Mimulus guttatus mgf018114m I 0.715
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.715
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.715
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.715
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.715
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.715
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.715
Carubv10001366m.g Capsella rubella Carubv10001366m.g I 0.713
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.713
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I 0.713
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.712
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.711
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.711
Bra029553 Brassica rapa Bra029553 I 0.710
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.710
Bo9g076410 Brassica oleracea Bo9g076410 I 0.710
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.710
Si030273m.g Setaria italica Si030273m.g I 0.710
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.710
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.710
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.709
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.707
GSMUA_Achr9G24560_001 Musa acuminata GSMUA_Achr9G24560_001 I 0.707
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.706
GLYMA13G35810 Glycine max GLYMA13G35810 I 0.705
GLYMA12G34650 Glycine max GLYMA12G34650 I 0.705
Gorai.012G132200 Gossypium raimondii Gorai.012G132200 I 0.702
gene01992-v1.0-hybrid Fragaria vesca gene01992-v1.0-hybrid I 0.698
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I 0.698
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I 0.698
Aquca_038_00198 Aquilegia coerulea Aquca_038_00198 I 0.697
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.697
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.697
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.697
Carubv10004873m.g Capsella rubella Carubv10004873m.g I 0.696
Cagra.2455s0004 Capsella grandiflora Cagra.2455s0004 I 0.696
ATMYB102 Arabidopsis lyrata fgenesh2_kg.7__2173__AT4G21440.1 I 0.696
Bra038774 Brassica rapa Bra038774 I 0.696
Bra020892 Brassica rapa Bra020892 I 0.696
Thhalv10027571m.g Eutrema salsugineum Thhalv10027571m.g I 0.696
ATMYB102 Arabidopsis thaliana AT4G21440 I 0.696
Bo3g162580 Brassica oleracea Bo3g162580 I 0.696
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.695
Ca_00232 Cicer arietinum Ca_00232 I 0.694
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.694
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.694
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.694
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.694
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I 0.693
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I 0.693
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.693
Bo7g107420 Brassica oleracea Bo7g107420 I 0.692
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.692
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.691
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.691
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.691
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.690
Ca_11494 Cicer arietinum Ca_11494 I 0.689
Bostr.10689s0089 Boechera stricta Bostr.10689s0089 I 0.687
Lus10002593.g Linum usitatissimum Lus10002593.g I 0.687
POPTR_0001s41920 Populus trichocarpa POPTR_0001s41920 I 0.686
SapurV1A.0840s0010 Salix purpurea SapurV1A.0840s0010 I 0.686
Bo3g022210 Brassica oleracea Bo3g022210 I 0.685
Bra029033 Brassica rapa Bra029033 I 0.685
chr3.CM0590.850.nc Lotus japonicus chr3.CM0590.850.nc I 0.684
MTR_4g091490 Medicago truncatula MTR_4g091490 I 0.683
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.681
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.679
Bo1g024170 Brassica oleracea Bo1g024170 I 0.679
OB04G26860 Oryza brachyantha OB04G26860 I 0.679
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.679
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.679
Bra013526 Brassica rapa Bra013526 I 0.679
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.679
cassava41325.m1 Manihot esculenta cassava41325.m1 I 0.677
GSMUA_Achr6G29310_001 Musa acuminata GSMUA_Achr6G29310_001 I 0.677
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.677
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.677
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.675
Eucgr.F01069 Eucalyptus grandis Eucgr.F01069 I 0.675
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.673
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I 0.673
TCM_031294 Theobroma cacao TCM_031294 I 0.673
cassava44885.m1 Manihot esculenta cassava44885.m1 I 0.672
chr1.CM0295.20.nd Lotus japonicus chr1.CM0295.20.nd I 0.671
Ca_22021 Cicer arietinum Ca_22021 I 0.670
evm.TU.supercontig_12.22 Carica papaya evm.TU.supercontig_12.22 I 0.670
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I 0.669
Traes_2AS_FA7059723 Triticum aestivum Traes_2AS_FA7059723 I 0.669
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.668
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.668
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.668
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.668
Pm020596 Prunus mume Pm020596 I 0.668
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I 0.666
Pm011657 Prunus mume Pm011657 I 0.666
TCM_016551 Theobroma cacao TCM_016551 I 0.666
GLYMA01G02070 Glycine max GLYMA01G02070 I 0.666
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.664
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.664
MYB39 Arabidopsis thaliana AT4G17785 D 0.664
MTR_7g115650 Medicago truncatula MTR_7g115650 I 0.664
F775_02918 Aegilops tauschii F775_02918 I 0.664
Traes_2DS_49959692B Triticum aestivum Traes_2DS_49959692B I 0.664
Traes_2DS_49959692B1 Triticum aestivum Traes_2DS_49959692B1 I 0.664
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.663
30054.m000809 Ricinus communis 30054.m000809 I 0.663
Cucsa.022180 Cucumis sativus Cucsa.022180 I 0.663
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.663
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I 0.662
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.662
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I 0.662
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.661