GLYMA17G14291 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA17G14291 T271706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.819 0.914
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.758 0.860
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH

DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.754 0.806
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH

DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.754 0.806
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC

GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.675 0.634
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH

DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.675 0.634
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN

NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.675 0.634
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G14291.1 Myb 80 127
GLYMA17G14291.1 Myb 133 178
GLYMA17G14291.2 Myb 80 127
GLYMA17G14291.2 Myb 133 178

Links

Other Myb/SANT family TFs
Other Glycine max TFs

320 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG003708.1 Alligator sinensis Alligator_sinensis_CCG003708.1 N 0.000
Cmyd_10013223 Chelonia mydas Cmyd_10013223 N 0.000
ENSAMEG00000017065 Ailuropoda melanoleuca ENSAMEG00000017065 N 0.000
ENSAMXG00000008132 Astyanax mexicanus ENSAMXG00000008132 N 0.000
NPAS4 Bos taurus ENSBTAG00000014925 N 0.000
ENSBTAP00000019870-D1 Bos grunniens ENSBTAP00000019870-D1 N 0.000
NPAS4 Canis familiaris ENSCAFG00000012711 N 0.000
NPAS4 Callithrix jacchus ENSCJAG00000001482 N 0.000
NPAS4 Cavia porcellus ENSCPOG00000000685 N 0.000
ENSCSAG00000008212 Chlorocebus sabaeus ENSCSAG00000008212 N 0.000
npas4a Danio rerio ENSDARG00000055752 N 0.000
npas4b Danio rerio ENSDARG00000087753 N 0.000
NPAS4 Dasypus novemcinctus ENSDNOG00000042408 N 0.000
NPAS4 Equus caballus ENSECAG00000013683 N 0.000
NPAS4 Erinaceus europaeus ENSEEUG00000004685 N 0.000
NPAS4 Echinops telfairi ENSETEG00000003654 N 0.000
NPAS4 Felis catus ENSFCAG00000009299 N 0.000
NPAS4 Homo sapiens ENSG00000174576 N 0.000
npas4a Gasterosteus aculeatus ENSGACG00000017076 N 0.000
NPAS4 Gorilla gorilla ENSGGOG00000008608 N 0.000
ENSGMOG00000003455 Gadus morhua ENSGMOG00000003455 N 0.000
NPAS4 Loxodonta africana ENSLAFG00000011138 N 0.000
ENSLOCG00000000650 Lepisosteus oculatus ENSLOCG00000000650 N 0.000
ENSMEUG00000004384 Macropus eugenii ENSMEUG00000004384 N 0.000
NPAS4 Microcebus murinus ENSMICG00000003754 N 0.000
NPAS4 Myotis lucifugus ENSMLUG00000004042 N 0.000
NPAS4 Macaca mulatta ENSMMUG00000015982 N 0.000
NPAS4 Monodelphis domestica ENSMODG00000008299 N 0.000
ENSMPUG00000003040 Mustela putorius furo ENSMPUG00000003040 N 0.000
ENSNLEG00000006104 Nomascus leucogenys ENSNLEG00000006104 N 0.000
ENSOARG00000005005 Ovis aries ENSOARG00000005005 N 0.000
NPAS4 Oryctolagus cuniculus ENSOCUG00000000905 N 0.000
NPAS4 Otolemur garnettii ENSOGAG00000010446 N 0.000
ENSONIG00000005476 Oreochromis niloticus ENSONIG00000005476 N 0.000
NPAS4 Ochotona princeps ENSOPRG00000008977 N 0.000
npas4a Oryzias latipes ENSORLG00000001999 N 0.000
ENSP00000311196 Macaca fascicularis ENSP00000311196 N 0.000
ENSPANG00000007006 Papio anubis ENSPANG00000007006 N 0.000
ENSPFOG00000009551 Poecilia formosa ENSPFOG00000009551 N 0.000
ENSPPYG00000003026 Pongo abelii ENSPPYG00000003026 N 0.000
NPAS4 Pan troglodytes ENSPTRG00000003923 N 0.000
NPAS4 Pteropus vampyrus ENSPVAG00000001233 N 0.000
Npas4 Rattus norvegicus ENSRNOG00000020009 N 0.000
NPAS4 Sorex araneus ENSSARG00000003603 N 0.000
ENSSHAG00000009488 Sarcophilus harrisii ENSSHAG00000009488 N 0.000
NPAS4 Sus scrofa ENSSSCG00000012942 N 0.000
ENSSTOG00000023146 Ictidomys tridecemlineatus ENSSTOG00000023146 N 0.000
npas4a Tetraodon nigroviridis ENSTNIG00000016823 N 0.000
npas4a Takifugu rubripes ENSTRUG00000011857 N 0.000
ENSTSYG00000001991 Tarsius syrichta ENSTSYG00000001991 N 0.000
NPAS4 Tursiops truncatus ENSTTRG00000001951 N 0.000
ENSXMAG00000013170 Xiphophorus maculatus ENSXMAG00000013170 N 0.000
Myotis_brandtii_NPAS4_10030769 Myotis brandtii Myotis_brandtii_NPAS4_10030769 N 0.000
Ogr08183 Ophisaurus gracilis Ogr08183 N 0.000
Pvit_07066 Pogona vitticeps Pvit_07066 N 0.000
npas4 Xenopus tropicalis XB-GENE-993002 N 0.000