GLYMA18G18140 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA18G18140 T271739_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.717 0.826
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.717 0.826
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.717 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G18140.2 Myb 122 167
GLYMA18G18140.3 Myb 122 167
GLYMA18G18140.4 Myb 122 167
GLYMA18G18140.5 Myb 122 167
GLYMA18G18140.6 Myb 122 167
GLYMA18G18140.7 Myb 122 167

Links

Other Myb/SANT family TFs
Other Glycine max TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30075.m001182 Ricinus communis 30075.m001182 N 0.000
Al_scaffold_0003_1456 Arabidopsis lyrata Al_scaffold_0003_1456 N 0.000
AMTR_s00024p00195160 Amborella trichopoda AMTR_s00024p00195160 I 0.000
AMTR_s00048p00192930 Amborella trichopoda AMTR_s00048p00192930 I 0.000
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.000
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.000
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.000
Bo1g134650 Brassica oleracea Bo1g134650 N 0.000
Bo5g063060 Brassica oleracea Bo5g063060 N 0.000
Bo5g105110 Brassica oleracea Bo5g105110 I 0.000
Bo9g169310 Brassica oleracea Bo9g169310 N 0.000
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.000
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N 0.000
Bostr.2902s0020 Boechera stricta Bostr.2902s0020 N 0.000
Bra003867 Brassica rapa Bra003867 N 0.000
Bra021527 Brassica rapa Bra021527 N 0.000
Bra023378 Brassica rapa Bra023378 N 0.000
Bra023913 Brassica rapa Bra023913 N 0.000
Bra031242 Brassica rapa Bra031242 I 0.000
Bra032395 Brassica rapa Bra032395 N 0.000
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I 0.000
BRADI4G01820 Brachypodium distachyon BRADI4G01820 N 0.000
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N 0.000
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.000
Cagra.1535s0021 Capsella grandiflora Cagra.1535s0021 N 0.000
Carubv10001701m.g Capsella rubella Carubv10001701m.g N 0.000
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.000
Carubv10014289m.g Capsella rubella Carubv10014289m.g N 0.000
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I 0.000
Ca_00866 Cicer arietinum Ca_00866 N 0.000
Ca_07995 Cicer arietinum Ca_07995 N 0.000
Ca_11593 Cicer arietinum Ca_11593 N 0.000
Ca_20250 Cicer arietinum Ca_20250 N 0.000
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I 0.000
Cla008690 Citrullus lanatus Cla008690 N 0.000
Cla009990 Citrullus lanatus Cla009990 N 0.000
Cla015490 Citrullus lanatus Cla015490 I 0.000
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.000
Cucsa.124180 Cucumis sativus Cucsa.124180 N 0.000
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.000
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N 0.000
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N 0.000
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N 0.000
Eucgr.F03169 Eucalyptus grandis Eucgr.F03169 I 0.000
Eucgr.J00764 Eucalyptus grandis Eucgr.J00764 N 0.000
EuGene.0000150165 Micromonas pusilla EuGene.0000150165 N 0.000
F775_09086 Aegilops tauschii F775_09086 N 0.000
fgenesh1_pg.C_scaffold_286000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_286000001 N 0.000
fgeneshCV_pg.C_scaffold_3000204 Chlorella vulgaris fgeneshCV_pg.C_scaffold_3000204 I 0.000
Genemark1.1758_g Coccomyxa subellipsoidea C169 Genemark1.1758_g I 0.000
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.000
GLYMA05G29970 Glycine max GLYMA05G29970 N 0.000
GLYMA07G04050 Glycine max GLYMA07G04050 I 0.000
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.000
GLYMA09G07960 Glycine max GLYMA09G07960 I 0.000
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.000
GLYMA15G18970 Glycine max GLYMA15G18970 I 0.000
GLYMA17G05920 Glycine max GLYMA17G05920 I 0.000
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.000
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.000
Gorai.009G143800 Gossypium raimondii Gorai.009G143800 N 0.000
Gorai.010G086300 Gossypium raimondii Gorai.010G086300 N 0.000
Gorai.011G057600 Gossypium raimondii Gorai.011G057600 N 0.000
Gorai.013G226200 Gossypium raimondii Gorai.013G226200 I 0.000
Gorai.013G251200 Gossypium raimondii Gorai.013G251200 N 0.000
GRMZM2G026157 Zea mays GRMZM2G026157 N 0.000
GRMZM2G091964 Zea mays GRMZM2G091964 I 0.000
GRMZM2G165488 Zea mays GRMZM2G165488 N 0.000
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.000
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.000
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N 0.000
GSMUA_AchrUn_randomG15140_001 Musa acuminata GSMUA_AchrUn_randomG15140_001 I 0.000
HAP2A Arabidopsis lyrata Al_scaffold_0006_1178 N 0.000
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.000
LPERR08G05240 Leersia perrieri LPERR08G05240 N 0.000
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.000
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.000
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.000
Lus10016411.g Linum usitatissimum Lus10016411.g I 0.000
Lus10019708.g Linum usitatissimum Lus10019708.g I 0.000
Lus10023358.g Linum usitatissimum Lus10023358.g N 0.000
Lus10038448.g Linum usitatissimum Lus10038448.g N 0.000
MDP0000296077 Malus domestica MDP0000296077 N 0.000
MDP0000314593 Malus domestica MDP0000314593 N 0.000
mg014677m Mimulus guttatus mg014677m N 0.000
mgf012950m Mimulus guttatus mgf012950m I 0.000
MLOC_52315 Hordeum vulgare MLOC_52315 N 0.000
MLOC_5869 Hordeum vulgare MLOC_5869 N 0.000
MLOC_76757 Hordeum vulgare MLOC_76757 N 0.000
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.000
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N 0.000
NFYA1 Arabidopsis thaliana AT5G12840 N 0.000
NFYA9 Arabidopsis thaliana AT3G20910 N 0.000
OPUNC08G05330 Oryza punctata OPUNC08G05330 N 0.000
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I 0.000
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N 0.000
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I 0.000
Pavir.J08102 Panicum virgatum Pavir.J08102 I 0.000
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N 0.000
PDK_20s1414531g001 Phoenix dactylifera PDK_20s1414531g001 N 0.000
PDK_20s1474561g001 Phoenix dactylifera PDK_20s1474561g001 N 0.000
PGSC0003DMG400008148 Solanum tuberosum PGSC0003DMG400008148 N 0.000
PK21261.1 Cannabis sativa PK21261.1 I 0.000
Pm010516 Prunus mume Pm010516 N 0.000
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N 0.000
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I 0.000
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N 0.000
SapurV1A.0027s0420 Salix purpurea SapurV1A.0027s0420 N 0.000
SapurV1A.0083s0230 Salix purpurea SapurV1A.0083s0230 N 0.000
SapurV1A.0534s0150 Salix purpurea SapurV1A.0534s0150 N 0.000
SapurV1A.2739s0010 Salix purpurea SapurV1A.2739s0010 N 0.000
Sb01g011220 Sorghum bicolor Sb01g011220 I 0.000
Si037045m.g Setaria italica Si037045m.g I 0.000
Solyc01g008490.2 Solanum lycopersicum Solyc01g008490.2 N 0.000
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I 0.000
TCM_040712 Theobroma cacao TCM_040712 I 0.000
Thhalv10009032m.g Eutrema salsugineum Thhalv10009032m.g N 0.000
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I 0.000
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I 0.000
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I 0.000
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.000
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.000
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.000
Traes_6DL_FD903DBD8 Triticum aestivum Traes_6DL_FD903DBD8 I 0.000
TRIUR3_09920 Triticum urartu TRIUR3_09920 I 0.000
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.000
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.000
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.000
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I 0.000