CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA18G43130
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA18G43130
T271749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.718
0.766
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS
SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.718
0.766
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.718
0.766
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.718
0.766
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.701
0.787
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.701
0.766
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.686
0.660
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.671
0.702
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.667
0.681
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.667
0.681
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.661
0.702
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.661
0.702
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA18G43130.1
Myb
16
70
RLRWTQELHDRFVEAVNRLGGPERATPKGILKEMKAMGVSELNIYHVKSHLQKYR
GLYMA18G43130.2
Myb
16
70
RLRWTQELHDRFVEAVNRLGGPERATPKGILKEMKAMGVSELNIYHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
574 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy