GLYMA20G01450 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA20G01450 T271802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SRM1
M02307_2.00
Arabidopsis thaliana
NNHNATCNN

NNGATNDNN
PBM
Weirauch et al.(2014)
pTH7080
0.734 0.848
SRM1
M07121_2.00
Arabidopsis thaliana
YCTTATCYWHW

WDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a
0.734 0.848
SRM1
M07122_2.00
Arabidopsis thaliana
YCTTATCYWHWWH

DWWDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_col_b
0.734 0.848
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G01450.1 Myb 122 167

Links

Other Myb/SANT family TFs
Other Glycine max TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30131.m007263 Ricinus communis 30131.m007263 I 0.859
30174.m008717 Ricinus communis 30174.m008717 I 0.685
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.690
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.801
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.678
BGIOSGA014092 Oryza indica BGIOSGA014092 N 0.666
Bo2g009130 Brassica oleracea Bo2g009130 I 0.673
Bo3g004970 Brassica oleracea Bo3g004970 I 0.673
Bo9g174380 Brassica oleracea Bo9g174380 I 0.686
Bostr.10199s0068 Boechera stricta Bostr.10199s0068 I 0.676
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.722
Bra009346 Brassica rapa Bra009346 I 0.665
Bra028654 Brassica rapa Bra028654 I 0.662
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.676
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.734
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.734
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.849
cassava42566.valid.m1 Manihot esculenta cassava42566.valid.m1 N 0.663
Ca_05454 Cicer arietinum Ca_05454 I 0.682
Ca_19000 Cicer arietinum Ca_19000 I 0.818
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.664
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.822
Cla009230 Citrullus lanatus Cla009230 I 0.831
Cla020348 Citrullus lanatus Cla020348 I 0.800
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.831
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.818
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.822
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.759
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.834
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.686
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.729
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N 0.740
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.675
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.904
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.828
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.682
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.812
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.682
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.864
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.665
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.875
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.810
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.855
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.716
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.779
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.853
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.856
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.815
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.712
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.786
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.772
MDP0000289018 Malus domestica MDP0000289018 I 0.680
mgf009460m Mimulus guttatus mgf009460m I 0.779
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.692
MTR_8g063600 Medicago truncatula MTR_8g063600 N 0.664
OB04G36550 Oryza brachyantha OB04G36550 N 0.710
OBART04G29570 Oryza barthii OBART04G29570 N 0.666
OMERI04G25000 Oryza meridionalis OMERI04G25000 N 0.666
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.666
OPUNC04G27130 Oryza punctata OPUNC04G27130 N 0.666
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.822
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N 0.666
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N 0.666
OS04G0676700 Oryza sativa OS04G0676700 N 0.666
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.751
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.751
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.766
PK13672.1 Cannabis sativa PK13672.1 I 0.806
Pm006046 Prunus mume Pm006046 I 0.838
Pm017050 Prunus mume Pm017050 I 0.705
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.877
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.705
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.848
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.830
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.663
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.663
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.716
Si022762m.g Setaria italica Si022762m.g N 0.745
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.731
SRM1 Arabidopsis thaliana AT5G08520 D 0.734
TCM_007672 Theobroma cacao TCM_007672 I 0.864
TCM_041160 Theobroma cacao TCM_041160 I 0.669
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.734
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.838