GRMZM2G016020 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G016020 T271890_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI staff.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.854 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G016020_P01 Myb 14 61
GRMZM2G016020_P01 Myb 67 88

Links

Other Myb/SANT family TFs
Other Zea mays TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.909
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.854
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.821
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.790
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.788
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.782
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.779
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.737
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.737
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.736
30076.m004682 Ricinus communis 30076.m004682 I 0.735
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.731
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.717
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N 0.710
29889.m003258 Ricinus communis 29889.m003258 I 0.710
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N 0.710
GRMZM2G112263 Zea mays GRMZM2G112263 N 0.704
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.700
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.699
mgf024704m Mimulus guttatus mgf024704m N 0.684
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.677
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.677
Bra009245 Brassica rapa Bra009245 N 0.672
Traes_4BL_F7B9CBA99 Triticum aestivum Traes_4BL_F7B9CBA99 N 0.672
Lus10000008.g Linum usitatissimum Lus10000008.g N 0.670
F775_20860 Aegilops tauschii F775_20860 I 0.669
OS08G0433400 Oryza sativa OS08G0433400 N 0.667
29904.m003061 Ricinus communis 29904.m003061 N 0.664
F775_04823 Aegilops tauschii F775_04823 I 0.663