GRMZM2G048136 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G048136 T271927_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.755 0.828
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.664 0.699
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.664 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G048136_P01 Myb 1 43
GRMZM2G048136_P02 Myb 10 57
GRMZM2G048136_P02 Myb 63 108

Links

Other Myb/SANT family TFs
Other Zea mays TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si026803m.g Setaria italica Si026803m.g I 0.868
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.868
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I 0.862
Sb05g027370 Sorghum bicolor Sb05g027370 N 0.860
TRIUR3_16687 Triticum urartu TRIUR3_16687 I 0.855
F775_28589 Aegilops tauschii F775_28589 I 0.855
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I 0.855
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I 0.855
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I 0.855
MYBAS1 Oryza sativa OS11G0700500 I 0.855
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I 0.855
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.855
BGIOSGA033532 Oryza indica BGIOSGA033532 I 0.855
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.854
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.854
Si023104m.g Setaria italica Si023104m.g I 0.854
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.854
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.854
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.838
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.836
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N 0.836
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.834
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N 0.828
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.820
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.820
Pavir.J11826 Panicum virgatum Pavir.J11826 I 0.816
OB11G27690 Oryza brachyantha OB11G27690 I 0.810
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.810
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.808
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.808
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.808
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.805
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.805
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.805
OB12G23080 Oryza brachyantha OB12G23080 I 0.805
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.805
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.805
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.805
MYBAS2 Oryza sativa OS12G0567300 I 0.805
F775_06315 Aegilops tauschii F775_06315 I 0.796
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.796
PK16488.1 Cannabis sativa PK16488.1 N 0.794
Ciclev10006469m.g Citrus clementina Ciclev10006469m.g N 0.794
Sb05g027360 Sorghum bicolor Sb05g027360 I 0.793
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I 0.790
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.778
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.772
MDP0000177010 Malus domestica MDP0000177010 I 0.770
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.770
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.768
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N 0.768
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.768
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N 0.768
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.768
MYB59 Arabidopsis thaliana AT5G59780 D 0.768
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.768
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.768
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.768
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.768
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.768
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.768
Carubv10027237m.g Capsella rubella Carubv10027237m.g N 0.768
MDP0000143156 Malus domestica MDP0000143156 I 0.765
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.764
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.764
Cla008413 Citrullus lanatus Cla008413 I 0.763
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.761
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.761
Cla013488 Citrullus lanatus Cla013488 I 0.759
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.759
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I 0.758
Solyc11g073120.1 Solanum lycopersicum Solyc11g073120.1 I 0.757
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.755
Bo3g130340 Brassica oleracea Bo3g130340 I 0.755
Bra018223 Brassica rapa Bra018223 I 0.755
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.755
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.755
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.755
TCM_041904 Theobroma cacao TCM_041904 I 0.755
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.752
Lus10040861.g Linum usitatissimum Lus10040861.g N 0.750
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N 0.750
Ca_16710 Cicer arietinum Ca_16710 N 0.750
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.750
mgf020363m Mimulus guttatus mgf020363m I 0.748
mgf025691m Mimulus guttatus mgf025691m I 0.748
Pm000809 Prunus mume Pm000809 I 0.746
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.746
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.746
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.746
Cagra.10348s0001 Capsella grandiflora Cagra.10348s0001 N 0.745
29788.m000340 Ricinus communis 29788.m000340 I 0.743
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.743
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.743
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N 0.742
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N 0.742
Solyc06g005330.2 Solanum lycopersicum Solyc06g005330.2 I 0.741
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.741
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.741
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.740
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.739
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.738
Traes_2DL_77F235694 Triticum aestivum Traes_2DL_77F235694 N 0.738
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.738
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.736
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.736
Ca_02593 Cicer arietinum Ca_02593 I 0.735
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.734
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.729
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.729
PGSC0003DMG402010883 Solanum tuberosum PGSC0003DMG402010883 N 0.727
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.725
Bo2g025410 Brassica oleracea Bo2g025410 I 0.725
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.725
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.725
F775_29427 Aegilops tauschii F775_29427 I 0.725
Bra020289 Brassica rapa Bra020289 I 0.725
OB01G54920 Oryza brachyantha OB01G54920 I 0.718
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.715
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.715
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.715
OBART01G45730 Oryza barthii OBART01G45730 I 0.715
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.715
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.715
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.715
TCM_022293 Theobroma cacao TCM_022293 I 0.714
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.711
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.711
Bra006694 Brassica rapa Bra006694 I 0.707
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.705
Bo9g140750 Brassica oleracea Bo9g140750 I 0.704
Bra002533 Brassica rapa Bra002533 I 0.704
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.702
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.702
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.701
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.698
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.696
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.696
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.696
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I 0.694
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.693
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.693
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.693
Pm009050 Prunus mume Pm009050 I 0.693
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.693
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.693
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.693
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.693
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.693
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.693
Ca_07872 Cicer arietinum Ca_07872 I 0.693
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.693
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.693
fgenesh2_kg.397__1__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.397__1__AT3G24310.1 N 0.691
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.688
Traes_2AL_E2F8D46CE Triticum aestivum Traes_2AL_E2F8D46CE N 0.688
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.686
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.686
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.686
GLYMA08G27660 Glycine max GLYMA08G27660 I 0.685
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I 0.682
F775_14172 Aegilops tauschii F775_14172 I 0.682
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I 0.682
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I 0.682
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.681
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.681
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.679
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.679
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I 0.676
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.676
OLONG_004480 Oryza longistaminata OLONG_004480 I 0.676
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.676
OB05G11070 Oryza brachyantha OB05G11070 I 0.676
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.676
PK07010.1 Cannabis sativa PK07010.1 N 0.676
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.676
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.676
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.676
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.676
OBART05G01080 Oryza barthii OBART05G01080 I 0.676
PK22178.1 Cannabis sativa PK22178.1 N 0.675
MDP0000183451 Malus domestica MDP0000183451 I 0.672
MDP0000133412 Malus domestica MDP0000133412 I 0.672
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.672
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.671
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.671
PK10274.1 Cannabis sativa PK10274.1 I 0.670
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.670
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.669
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.669
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.669
cassava15759.m1 Manihot esculenta cassava15759.m1 N 0.668
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.667
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.666
Lus10014453.g Linum usitatissimum Lus10014453.g I 0.665
MYB27 Arabidopsis thaliana AT3G53200 D 0.664
Si022826m.g Setaria italica Si022826m.g I 0.664
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.664
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.664
TCM_018971 Theobroma cacao TCM_018971 I 0.664
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.664
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.663
MYB305 Arabidopsis thaliana AT3G24310 I 0.663
Bra001941 Brassica rapa Bra001941 I 0.663
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.663
Bo7g033260 Brassica oleracea Bo7g033260 I 0.663
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I 0.663
Bra015029 Brassica rapa Bra015029 I 0.663
Bo1g098860 Brassica oleracea Bo1g098860 I 0.663
Bo3g083130 Brassica oleracea Bo3g083130 I 0.663
Cucsa.383230 Cucumis sativus Cucsa.383230 I 0.663
30072.m000986 Ricinus communis 30072.m000986 N 0.663
Bra028369 Brassica rapa Bra028369 I 0.663
GLYMA20G34140 Glycine max GLYMA20G34140 I 0.663
Cucsa.255900 Cucumis sativus Cucsa.255900 I 0.663
Cla021798 Citrullus lanatus Cla021798 I 0.663
Cla007745 Citrullus lanatus Cla007745 I 0.663
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I 0.663
TCM_021037 Theobroma cacao TCM_021037 I 0.663
Ca_11427 Cicer arietinum Ca_11427 N 0.663
Ca_20437 Cicer arietinum Ca_20437 I 0.663
mgf004640m Mimulus guttatus mgf004640m I 0.663
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I 0.663
GLYMA10G33450 Glycine max GLYMA10G33450 I 0.663
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.663
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.663
GLYMA04G26650 Glycine max GLYMA04G26650 I 0.663
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.663
GLYMA06G38340 Glycine max GLYMA06G38340 I 0.663
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.663
Si024470m.g Setaria italica Si024470m.g I 0.662
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.662
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.662
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.662
Pm015392 Prunus mume Pm015392 I 0.662
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.662
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.662
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.662
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.662
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.662
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.661
PRUPE_ppa024805mg Prunus persica PRUPE_ppa024805mg N 0.661