GRMZM2G078820 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G078820 T271973_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.864 0.945
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.696 0.703
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.687 0.747
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G078820_P01 Myb 12 58
GRMZM2G078820_P01 Myb 64 107

Links

Other Myb/SANT family TFs
Other Zea mays TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.883
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.883
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.883
Si006938m.g Setaria italica Si006938m.g I 0.883
MLOC_63964 Hordeum vulgare MLOC_63964 I 0.880
TRIUR3_25447 Triticum urartu TRIUR3_25447 I 0.880
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.866
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.864
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.864
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.864
OS02G0187700 Oryza sativa OS02G0187700 D 0.864
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.864
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.864
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.864
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.864
Traes_7DL_1FA87027B Triticum aestivum Traes_7DL_1FA87027B I 0.856
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.848
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.848
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.848
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.848
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.848
OS06G0637500 Oryza sativa OS06G0637500 I 0.848
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.848
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.847
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.847
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.847
Si017917m.g Setaria italica Si017917m.g I 0.847
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.847
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.839
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.838
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.831
MLOC_64963 Hordeum vulgare MLOC_64963 I 0.826
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.818
BRADI1G30252 Brachypodium distachyon BRADI1G30252 I 0.786
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.779
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.770
Pavir.J29846 Panicum virgatum Pavir.J29846 I 0.768
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.758
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.743
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.741
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.741
Si032789m.g Setaria italica Si032789m.g I 0.741
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.737
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.737
OS09G0106700 Oryza sativa OS09G0106700 I 0.737
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.737
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.737
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.737
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.737
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.737
OBART09G00310 Oryza barthii OBART09G00310 I 0.737
OB09G10200 Oryza brachyantha OB09G10200 I 0.737
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.728
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.728
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.728
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.728
mgf006151m Mimulus guttatus mgf006151m I 0.725
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.723
mgf003084m Mimulus guttatus mgf003084m I 0.722
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.720
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.713
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.710
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.710
29801.m003096 Ricinus communis 29801.m003096 I 0.710
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.709
Cla022889 Citrullus lanatus Cla022889 I 0.708
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.708
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.707
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.705
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.705
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.705
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.704
TCM_033907 Theobroma cacao TCM_033907 I 0.704
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.704
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.703
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.703
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.703
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.703
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.703
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.701
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.700
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.700
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.700
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.699
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.699
Pm018862 Prunus mume Pm018862 I 0.698
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.697
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.697
MYB1 Arabidopsis thaliana AT3G09230 D 0.696
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.696
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.696
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.696
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.695
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.694
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.694
mgf023922m Mimulus guttatus mgf023922m I 0.694
MDP0000284922 Malus domestica MDP0000284922 I 0.694
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.693
Cla021015 Citrullus lanatus Cla021015 I 0.693
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.693
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.693
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.692
mgf018580m Mimulus guttatus mgf018580m I 0.690
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.689
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.688
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.688
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.688
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.688
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.688
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.687
PK07741.1 Cannabis sativa PK07741.1 D 0.687
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.687
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.687
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.687
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.687
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.687
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.686
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.686
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.683
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.683
TCM_042629 Theobroma cacao TCM_042629 I 0.683
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.683
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.682
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.682
mgf025567m Mimulus guttatus mgf025567m I 0.682
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.681
Si001686m.g Setaria italica Si001686m.g I 0.681
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.681
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.681
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.681
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.681
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.681
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.681
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.680
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.680
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.680
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.679
PK29071.1 Cannabis sativa PK29071.1 I 0.678
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.678
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.677
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.677
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.677
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.675
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.674
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.674
MDP0000807341 Malus domestica MDP0000807341 I 0.674
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.674
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.673
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.672
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.671
mgf020432m Mimulus guttatus mgf020432m I 0.670
27798.m000612 Ricinus communis 27798.m000612 I 0.670
PK16550.1 Cannabis sativa PK16550.1 I 0.670
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.670
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.670
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.669
mgf015566m Mimulus guttatus mgf015566m I 0.668
MDP0000319124 Malus domestica MDP0000319124 I 0.667
MDP0000478512 Malus domestica MDP0000478512 I 0.667
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.667
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.667
Pm002576 Prunus mume Pm002576 I 0.667
Cla018417 Citrullus lanatus Cla018417 I 0.667
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.667
TCM_021796 Theobroma cacao TCM_021796 I 0.667
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.667
MDP0000203733 Malus domestica MDP0000203733 I 0.667
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.667
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.667
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.667
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.667
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.667
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.667
TCM_007138 Theobroma cacao TCM_007138 I 0.666
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I 0.666
PK17282.1 Cannabis sativa PK17282.1 I 0.666
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.665
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.664
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.664
30170.m013927 Ricinus communis 30170.m013927 I 0.664
Pm005220 Prunus mume Pm005220 I 0.664
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.664
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.664
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.664
MDP0000894463 Malus domestica MDP0000894463 I 0.664
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.664
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.664
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.664
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.664
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.663
Bo3g062160 Brassica oleracea Bo3g062160 I 0.663
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.663
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.663
MDP0000463846 Malus domestica MDP0000463846 I 0.663
Pm005332 Prunus mume Pm005332 I 0.663
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.663
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.663
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.663
30170.m013698 Ricinus communis 30170.m013698 I 0.663
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.661