GRMZM2G117244 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G117244 T272037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.670 0.753
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.670 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G117244_P01 Myb 14 62
GRMZM2G117244_P01 Myb 68 113

Links

Other Myb/SANT family TFs
Other Zea mays TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.670
AMTR_s00019p00201260 Amborella trichopoda AMTR_s00019p00201260 I 0.691
AMTR_s00044p00189590 Amborella trichopoda AMTR_s00044p00189590 I 0.678
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.703
Aquca_068_00041 Aquilegia coerulea Aquca_068_00041 I 0.713
RAX3 Arabidopsis thaliana AT3G49690 D 0.670
MYB36 Arabidopsis thaliana AT5G57620 I 0.700
ATMYB68 Arabidopsis thaliana AT5G65790 I 0.670
BGIOSGA009166 Oryza indica BGIOSGA009166 I 0.718
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.706
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.668
BGIOSGA028296 Oryza indica BGIOSGA028296 I 0.715
BGIOSGA029715 Oryza indica BGIOSGA029715 I 0.700
Bo2g030240 Brassica oleracea Bo2g030240 I 0.691
Bo2g168190 Brassica oleracea Bo2g168190 I 0.670
Bo3g019230 Brassica oleracea Bo3g019230 I 0.691
Bo3g097710 Brassica oleracea Bo3g097710 I 0.670
Bo8g078940 Brassica oleracea Bo8g078940 I 0.674
Bo9g018910 Brassica oleracea Bo9g018910 I 0.670
Bo9g133340 Brassica oleracea Bo9g133340 I 0.691
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I 0.670
Bostr.25542s0241 Boechera stricta Bostr.25542s0241 I 0.664
Bostr.26833s0495 Boechera stricta Bostr.26833s0495 I 0.691
Bra006811 Brassica rapa Bra006811 I 0.686
Bra017963 Brassica rapa Bra017963 I 0.674
Bra020428 Brassica rapa Bra020428 I 0.691
Bra024419 Brassica rapa Bra024419 I 0.670
Bra031847 Brassica rapa Bra031847 I 0.670
BRADI1G07260 Brachypodium distachyon BRADI1G07260 I 0.706
BRADI2G46770 Brachypodium distachyon BRADI2G46770 I 0.709
BRADI3G18977 Brachypodium distachyon BRADI3G18977 I 0.704
BRADI4G38965 Brachypodium distachyon BRADI4G38965 I 0.681
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I 0.670
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.674
Cagra.2848s0043 Capsella grandiflora Cagra.2848s0043 I 0.691
Cagra.4290s0002 Capsella grandiflora Cagra.4290s0002 I 0.664
Carubv10006843m.g Capsella rubella Carubv10006843m.g I 0.664
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.674
Carubv10026749m.g Capsella rubella Carubv10026749m.g I 0.691
Carubv10027655m.g Capsella rubella Carubv10027655m.g I 0.670
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.681
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.700
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.700
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.730
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.684
Ca_02249 Cicer arietinum Ca_02249 I 0.691
Ca_03266 Cicer arietinum Ca_03266 I 0.695
Ca_09203 Cicer arietinum Ca_09203 I 0.691
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I 0.689
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.700
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.668
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.704
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I 0.680
Cla014272 Citrullus lanatus Cla014272 I 0.700
Cla019089 Citrullus lanatus Cla019089 I 0.730
Cla021213 Citrullus lanatus Cla021213 I 0.693
Cla023198 Citrullus lanatus Cla023198 I 0.690
Cucsa.092250 Cucumis sativus Cucsa.092250 I 0.730
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.700
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.675
Cucsa.395340 Cucumis sativus Cucsa.395340 I 0.709
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I 0.695
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.706
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.706
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.724
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I 0.700
evm.TU.supercontig_160.24 Carica papaya evm.TU.supercontig_160.24 I 0.683
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.700
F775_02630 Aegilops tauschii F775_02630 I 0.704
F775_08680 Aegilops tauschii F775_08680 I 0.689
F775_22184 Aegilops tauschii F775_22184 I 0.751
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I 0.670
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.704
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.670
gene27379-v1.0-hybrid Fragaria vesca gene27379-v1.0-hybrid I 0.730
gene28902-v1.0-hybrid Fragaria vesca gene28902-v1.0-hybrid I 0.672
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.700
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.703
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.670
GLYMA05G23080 Glycine max GLYMA05G23080 I 0.663
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.691
GLYMA10G06190 Glycine max GLYMA10G06190 I 0.665
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.700
GLYMA13G01200 Glycine max GLYMA13G01200 I 0.700
GLYMA13G20510 Glycine max GLYMA13G20510 I 0.676
GLYMA14G10340 Glycine max GLYMA14G10340 I 0.683
GLYMA17G07330 Glycine max GLYMA17G07330 I 0.700
GLYMA17G16980 Glycine max GLYMA17G16980 I 0.684
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.668
Gorai.007G227500 Gossypium raimondii Gorai.007G227500 I 0.684
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.703
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.703
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.695
Gorai.010G028800 Gossypium raimondii Gorai.010G028800 I 0.700
Gorai.013G246200 Gossypium raimondii Gorai.013G246200 I 0.689
GRMZM2G011422 Zea mays GRMZM2G011422 I 0.715
GRMZM2G015021 Zea mays GRMZM2G015021 I 0.722
GRMZM2G104789 Zea mays GRMZM2G104789 I 0.680
GRMZM2G115859 Zea mays GRMZM2G115859 I 0.843
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.671
GSMUA_Achr1G04910_001 Musa acuminata GSMUA_Achr1G04910_001 I 0.696
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I 0.688
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.695
GSMUA_Achr5G22760_001 Musa acuminata GSMUA_Achr5G22760_001 I 0.734
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I 0.730
GSMUA_Achr6G30830_001 Musa acuminata GSMUA_Achr6G30830_001 I 0.678
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.692
GSMUA_Achr7G19530_001 Musa acuminata GSMUA_Achr7G19530_001 I 0.720
GSMUA_Achr7G25060_001 Musa acuminata GSMUA_Achr7G25060_001 I 0.671
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I 0.737
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I 0.705
GSMUA_Achr9G13610_001 Musa acuminata GSMUA_Achr9G13610_001 I 0.704
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I 0.700
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.730
LjSGA_060207.1 Lotus japonicus LjSGA_060207.1 I 0.676
LjT05A08.60.nd Lotus japonicus LjT05A08.60.nd I 0.664
LPERR01G22970 Leersia perrieri LPERR01G22970 I 0.674
LPERR02G28940 Leersia perrieri LPERR02G28940 I 0.718
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.706
LPERR09G07880 Leersia perrieri LPERR09G07880 I 0.700
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.700
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.700
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.724
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.683
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.724
Lus10039646.g Linum usitatissimum Lus10039646.g I 0.683
MDP0000124992 Malus domestica MDP0000124992 I 0.689
MDP0000262514 Malus domestica MDP0000262514 I 0.689
MDP0000322479 Malus domestica MDP0000322479 I 0.700
MDP0000786507 Malus domestica MDP0000786507 I 0.689
MDP0000809452 Malus domestica MDP0000809452 I 0.730
MDP0000851495 Malus domestica MDP0000851495 I 0.730
mgf020328m Mimulus guttatus mgf020328m I 0.691
mgf021409m Mimulus guttatus mgf021409m I 0.674
mgf021784m Mimulus guttatus mgf021784m I 0.666
mgf024894m Mimulus guttatus mgf024894m I 0.700
MLOC_5098 Hordeum vulgare MLOC_5098 I 0.712
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.689
MLOC_56989 Hordeum vulgare MLOC_56989 I 0.704
MLOC_58499 Hordeum vulgare MLOC_58499 I 0.718
MLOC_71129 Hordeum vulgare MLOC_71129 I 0.705
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.691
MTR_3g103570 Medicago truncatula MTR_3g103570 I 0.690
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.700
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.700
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.670
OB01G36020 Oryza brachyantha OB01G36020 I 0.674
OB02G41990 Oryza brachyantha OB02G41990 I 0.718
OB03G42660 Oryza brachyantha OB03G42660 I 0.706
OB05G32650 Oryza brachyantha OB05G32650 I 0.731
OB08G17260 Oryza brachyantha OB08G17260 I 0.685
OBART02G35180 Oryza barthii OBART02G35180 I 0.718
OBART03G35660 Oryza barthii OBART03G35660 I 0.706
OBART08G07560 Oryza barthii OBART08G07560 I 0.715
OGLUM02G36330 Oryza glumaepatula OGLUM02G36330 I 0.718
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.706
OGLUM08G08330 Oryza glumaepatula OGLUM08G08330 I 0.715
OLONG_007639 Oryza longistaminata OLONG_007639 I 0.718
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.706
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.706
OMERI09G08730 Oryza meridionalis OMERI09G08730 I 0.696
OMERI10G01610 Oryza meridionalis OMERI10G01610 I 0.715
ONIVA02G37300 Oryza nivara ONIVA02G37300 I 0.718
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.706
ONIVA08G08510 Oryza nivara ONIVA08G08510 I 0.715
OPUNC02G32390 Oryza punctata OPUNC02G32390 I 0.718
OPUNC03G32690 Oryza punctata OPUNC03G32690 I 0.706
OPUNC08G07200 Oryza punctata OPUNC08G07200 I 0.715
OPUNC09G09680 Oryza punctata OPUNC09G09680 I 0.700
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.700
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I 0.680
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.668
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.704
ORGLA02G0304700 Oryza glaberrima ORGLA02G0304700 I 0.718
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.706
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.668
ORGLA08G0066000 Oryza glaberrima ORGLA08G0066000 I 0.715
ORGLA09G0083700 Oryza glaberrima ORGLA09G0083700 I 0.696
ORUFI02G36680 Oryza rufipogon ORUFI02G36680 I 0.718
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.706
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.668
ORUFI08G08790 Oryza rufipogon ORUFI08G08790 I 0.715
ORUFI09G12010 Oryza rufipogon ORUFI09G12010 I 0.692
OS02G0786400 Oryza sativa OS02G0786400 I 0.718
OS03G0771100 Oryza sativa OS03G0771100 I 0.706
OS05G0553400 Oryza sativa OS05G0553400 I 0.668
OS08G0248700 Oryza sativa OS08G0248700 I 0.715
Pavir.Aa00264 Panicum virgatum Pavir.Aa00264 I 0.718
Pavir.Aa03183 Panicum virgatum Pavir.Aa03183 I 0.855
Pavir.Ab03119 Panicum virgatum Pavir.Ab03119 I 0.718
Pavir.Bb02272 Panicum virgatum Pavir.Bb02272 I 0.864
Pavir.Fb01086 Panicum virgatum Pavir.Fb01086 I 0.706
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.706
Pavir.J07059 Panicum virgatum Pavir.J07059 I 0.684
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.674
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.689
Pavir.J34453 Panicum virgatum Pavir.J34453 I 0.681
Pavir.J37063 Panicum virgatum Pavir.J37063 I 0.715
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.702
PGSC0003DMG400018750 Solanum tuberosum PGSC0003DMG400018750 I 0.730
PK02305.1 Cannabis sativa PK02305.1 I 0.700
PK05741.1 Cannabis sativa PK05741.1 I 0.683
PK26008.1 Cannabis sativa PK26008.1 I 0.691
Pm002200 Prunus mume Pm002200 I 0.691
Pm008668 Prunus mume Pm008668 I 0.730
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.700
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I 0.689
POPTR_0007s14630 Populus trichocarpa POPTR_0007s14630 I 0.700
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.695
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I 0.700
PRUPE_ppa023431mg Prunus persica PRUPE_ppa023431mg I 0.730
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.680
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.664
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.700
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.686
SapurV1A.0608s0210 Salix purpurea SapurV1A.0608s0210 I 0.700
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.699
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.706
Sb02g025350 Sorghum bicolor Sb02g025350 I 0.864
Sb07g008580 Sorghum bicolor Sb07g008580 I 0.715
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.674
MYB36 Arabidopsis lyrata scaffold_802340.1 I 0.691
Si002350m.g Setaria italica Si002350m.g I 0.681
Si015585m.g Setaria italica Si015585m.g I 0.715
Si017415m.g Setaria italica Si017415m.g I 0.718
Si022874m.g Setaria italica Si022874m.g I 0.665
Si030282m.g Setaria italica Si030282m.g I 0.864
Si036681m.g Setaria italica Si036681m.g I 0.697
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.702
Solyc07g006750.2 Solanum lycopersicum Solyc07g006750.2 I 0.730
TCM_000861 Theobroma cacao TCM_000861 I 0.689
TCM_034634 Theobroma cacao TCM_034634 I 0.700
TCM_037245 Theobroma cacao TCM_037245 I 0.664
TCM_038898 Theobroma cacao TCM_038898 I 0.703
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I 0.670
Thhalv10015689m.g Eutrema salsugineum Thhalv10015689m.g I 0.691
TRAES3BF058700130CFD_g Triticum aestivum TRAES3BF058700130CFD_g I 0.705
Traes_1AL_50CECDF43 Triticum aestivum Traes_1AL_50CECDF43 I 0.704
Traes_1AL_F0688BFDE Triticum aestivum Traes_1AL_F0688BFDE I 0.681
Traes_1BL_02507996C Triticum aestivum Traes_1BL_02507996C I 0.704
Traes_1DL_FCDEFA244 Triticum aestivum Traes_1DL_FCDEFA244 I 0.704
Traes_5AL_8008803A5 Triticum aestivum Traes_5AL_8008803A5 I 0.689
Traes_5BL_A848F629F Triticum aestivum Traes_5BL_A848F629F I 0.689
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.751
Traes_5DL_1521D205A Triticum aestivum Traes_5DL_1521D205A I 0.689
Traes_6AL_FF1508B19 Triticum aestivum Traes_6AL_FF1508B19 I 0.718
Traes_6BL_7755E4A8A Triticum aestivum Traes_6BL_7755E4A8A I 0.718
Traes_6DL_29EF04226 Triticum aestivum Traes_6DL_29EF04226 I 0.718
TRIUR3_13802 Triticum urartu TRIUR3_13802 I 0.718
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.696
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.700
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.700